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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:25:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus molossinus DNA, clone:MSMg01-421J10.T7, genomic survey sequence.
AG516179.1:180-199
CTTGGAACATCCAGTGAGTGTTATATACTG180CCAAATGCTTGAAACAAAGTGAAAGAGAGGAAGAGTGAGCTTCAGAGGTG
Inga oerstediana genome assembly, chromosome: 6.
OY723404.1:18773517-18773536
GAAAGACACTTGATTAATGATGGCATGATC18773517CCAAATGCTTGAAACAAAGTTTTTGAATGACTTGTTGGGGGCATCCATGA
Inga laurina genome assembly, chromosome: 5.
OY979705.1:18439414-18439433
GAAAGACACTTGATTAATGATGGCATGATC18439414CCAAATGCTTGAAACAAAGTTTTTGAATGACTGGTTGGGGGCATCCATGA
Inga laurina genome assembly, chromosome: 5.
OY979705.1:18617207-18617226
GAAAGACACTTGATTAATGATGGCATGATC18617207CCAAATGCTTGAAACAAAGTTTTTGAATGACTTGTTGGGGGCATCCATGA
Idaea aversata genome assembly, chromosome: 10.
OU026093.1:4236591-4236610
AAAGGAAAAGGTAGGAAAGTAATTTGAATC4236591CCAAATGCTTGAAACAAAGTTGAACAGAAATTCTGCAGAATTCTCATTAG
Achlya flavicornis genome assembly, chromosome: 4.
OX392470.1:13738762-13738781
TACGGTTCGTGAGCACTAACGTGGTACGGT13738762CCAAATGCTTGAAACAAAGTGCGCGAACATAGTTTGAACGAATAATACAT
Mouse DNA sequence from clone RP23-77I17 on chromosome 4.
AL772318.6:106817-106836
CACCTCTGAAGCTCACTCTTCCTGTCTTTC106817ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971568.1:90423785-90423804
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90423785ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971577.1:90029460-90029479
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90029460ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971597.1:89974148-89974167
CACCTCTGAAGCTCACTCTTCCTGTCTTTC89974148ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus domesticus genome assembly, chromosome: 4.
OW971626.1:89797977-89797996
CACCTCTGAAGCTCACTCTTCCTGTCTTTC89797977ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971639.1:89513647-89513666
CACCTCTGAAGCTCACTCTTCCTGTCTTTC89513647ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus molossinus genome assembly, chromosome: 4.
OW971661.1:90938854-90938873
CACCTCTGAAGCTCACTCTTCCTCTCTTTC90938854ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG
Mus spretus genome assembly, chromosome: 4.
OW971682.1:90730156-90730175
CACCTCTGAAGCTCACTCTTCCTCTCTTTC90730156ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG
Mus musculus genome assembly, chromosome: 4.
OW971712.1:88977344-88977363
CACCTCTGAAGCTCACTCTTCCTGTCTTTC88977344ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971723.1:90016517-90016536
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90016517ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971745.1:90566344-90566363
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90566344ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus musculus genome assembly, chromosome: 4.
OW971765.1:88682111-88682130
CACCTCTGAAGCTCACTCTTCCTCTCTTTC88682111ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG
Mus musculus genome assembly, chromosome: 4.
OW971786.1:89473739-89473758
CACCTCTGAAGCTCACTCTTCCTGTCTTTC89473739ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971808.1:90831626-90831645
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90831626ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus castaneus genome assembly, chromosome: 4.
OW971838.1:89819411-89819430
CACCTCTGAAGCTCACTCTTCCTGTCTTTC89819411ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OW971856.1:90452889-90452908
CACCTCTGAAGCTCACTCTTCCTGTCTTTC90452889ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OX389798.1:99275660-99275679
CACCTCTGAAGCTCACTCTTCCTGTCTTTC99275660ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OX390147.1:94125553-94125572
CACCTCTGAAGCTCACTCTTCCTGTCTTTC94125553ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Mus musculus genome assembly, chromosome: 4.
OX439018.1:102544126-102544145
CACCTCTGAAGCTCACTCTTCCTGTCTTTC102544126ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:112170332-112170351
GTCCTCTGACACCCACTTCCCCCTTCTCTT112170332ACTTTGTTTCAAGCATTTGGCAATATAAAGTACTCACTGGCTGTTTGAAG
Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:102600781-102600800
GTCCTCTGACACCCACTTCCCCCTTCTCTT102600781ACTTTGTTTCAAGCATTTGGCAATATAAAGCACTCACTGGCTGTTTGAAG
Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:112132577-112132596
GTCCTCTGACACCCACTTCCCCCTTCTCTT112132577ACTTTGTTTCAAGCATTTGGCAATATAAAGCACTCACTGGCTGTTTGAAG
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:114083802-114083821
GTCCTCTGACACCCACTTCCCCCTTCTCTT114083802ACTTTGTTTCAAGCATTTGGCAATATAAAGTACTCACTGGCTGTTTGAAG
Peromyscus eremicus genome assembly, chromosome: 2.
OX460467.1:109740094-109740113
AGACCCAGCCACTCACTTCCCTCCTCTCTT109740094ACTTTGTTTCAAGCATTTGGCAATATAAAGCCCTCACTGGCTGTTTGAAG
Cervus elaphus genome assembly, chromosome: 5.
OU343082.1:41888291-41888310
GGTAGACAACTTGACCCCTTCTTGGCTTGA41888291ACTTTGTTTCAAGCATTTGGAATTGGCACCAAAAAAATATAAAGTCTGCA
Muntiacus reevesi genome assembly, chromosome: 13.
OZ005637.1:42621340-42621359
GGTAGACAACTTGACCCCTTCTTGACTTGA42621340ACTTTGTTTCAAGCATTTGGAATTGGCACCAAAAAAATATAAAGTCTGCA
Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 3.
OU383775.1:57871758-57871777
TTAAGGTAATATATTTGTGAGGCCTTTGTT57871758ACTTTGTTTCAAGCATTTGGGTGGGATGAGCTCTTCCTACAGTGAGGTTA
Vipera ursinii genome assembly, chromosome: 13.
OX365978.1:2720058-2720077
AATAATAATAATAATAACATTAATAAAAAG2720058ACTTTGTTTCAAGCATTTGGGCAGCTGGCCCAGGATGTTTCAAAAGAATT
Inga oerstediana genome assembly, chromosome: 6.
OY723404.1:18649195-18649214
TCATGGATGCCCCCAACAAGTCATTCAAAA18649195ACTTTGTTTCAAGCATTTGGGATCATGCCATCATTAATCAAGTGTCTATC
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:6376730-6376749
CAATACAACGTTTCACTTCATTATGTCTTG6376730ACTTTGTTTCAAGCATTTGGTCATGAATAAATAAATGCATATTCACCAAC
Inga laurina genome assembly, chromosome: 5.
OY979705.1:18231611-18231630
TCATGGATGCCCCCAACAAGTCATTCAAAA18231611ACTTTGTTTCAAGCATTTGGGATCATGCCATCATTAATCAAGTGTCTATC
Idaea straminata genome assembly, chromosome: 11.
OX577856.1:10531536-10531555
CTAATGAAAATTCAGCAGAATTTCTGTTCA10531536ACTTTGTTTCAAGCATTTGGGATTCAAATTACTTTCCTACCTTTTCCTTT
Octopus vulgaris genome assembly, chromosome: 2.
OX597815.1:84845120-84845139
TACCATCCTTGGGTGCCTTTAGATAAGACT84845120ACTTTGTTTCAAGCATTTGGCCAGGTCTCTGATTTGAGGATAGCCTCCTA
Octopus vulgaris genome assembly, chromosome: 5.
OX597818.1:16195180-16195199
CTTCATTCTTGTCAGCCTTTAGTGGTGTCA16195180ACTTTGTTTCAAGCATTTGGGCAGAGTCATCTATCTGTAGATGACTTCTC
Maratus speciosus genome assembly, chromosome: 13.
OZ010800.1:10648592-10648611
TATATGATTAGTTCAGTTCACTTTTAAGAA10648592ACTTTGTTTCAAGCATTTGGGAAAAATGCTGCAGTCAGATTTTTCTATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAATGCTTGAAACAAAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAATGCTTGAAACAAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.184 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAATGCTTGAAACAAAGT&k=0&no_gap=0&offset=0&limit=50
0.287 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTTGTTTCAAGCATTTGG&k=0&no_gap=0&offset=0&limit=44
0.310 | 0.023 | cgi_end;

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