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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:33:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Onychomys torridus genome assembly, chromosome: 2.
LR877189.1:41616767-41616787
TGAATTTGTCCAGAGCTGTTTAAGAATATT41616767CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:41691775-41691795
TGAATTTGTCCAGAGCTGTTTAAGAATATT41691775CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:41831231-41831251
TGAATTTGTCCAGAGCTGTATAAGAATATT41831231CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:41343766-41343786
TGAATTTGTCCAGAGCTGTATAAGAATATT41343766CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:43220965-43220985
TGAATTTGTCCAGAGCTGTTTAAGAATATT43220965CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys torridus genome assembly, chromosome: 2.
OX460883.1:41616767-41616787
TGAATTTGTCCAGAGCTGTTTAAGAATATT41616767CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:23685808-23685828
AATCAAAGCAACACCTTCTCTAGCATTCGT23685808CCAAGTAAAGGGGTTTCCATCAAACCCTAAGTCTACAAGGCAAGCAGCATC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:32218191-32218211
AAGCTCTCTTGCCTTGTAGACTTAGGGTTT32218191GATGGAAACCCCTTTACTTGGACGAATGCTAGAGAAGGTGTTGCTTTGATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAGTAAAGGGGTTTCCATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAGTAAAGGGGTTTCCATC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.156 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAGTAAAGGGGTTTCCATC&k=0&no_gap=0&offset=0&limit=50
0.252 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=GATGGAAACCCCTTTACTTGG&k=0&no_gap=0&offset=0&limit=43
0.253 | 0.001 | cgi_end;

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