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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 04:55:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:12469165-12469186
AAAAGCCTTCCTCACTTCTCTTCCTTCCAA12469165CCACTCGCCAAAGTTAGTATTTCCATGGGATTCTCCATCATGCGCAGCATCA
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:12533217-12533238
AAACAACTTCCTCACTTCTCTTCCTTCTAA12533217CCACTCGCCAAAGTTAGTATTTCCATGGGATTCTGCATCATGCGCAGCATCA
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:12459022-12459043
AAAAGCCTTCCTCACTTCTCTTCCTTCCAA12459022CCACTCGCCAAAGTTAGTATTTCCATGGGATTCTCCATCATGCGCAGCATCA
Mddb5003n19.y1 Mddb Malus domestica cDNA clone Mddb5003n19 5', mRNA sequence.
CO723666.1:304-325
TGATGCTGCGCATGATGGAGAATCCCATGG304AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:19832988-19833009
TGATGCTGCGCATGATGGAGAATCCCATGG19832988AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:19983141-19983162
TGATGCTGCGCATGATGCAGAATCCCATGG19983141AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGTTGTTT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:19747335-19747356
TGATGCTGTGCATGATGCAGAATCCCATGG19747335AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:19390515-19390536
TGATGCTGTGCATGATGCAGAATCCCATGG19390515AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:19450942-19450963
TGATGCTGCGCATGATGGAGAATCCCATGG19450942AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:19595227-19595248
TGATGCTGTGCATGATGCAGAATCCCATGG19595227AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:19091763-19091784
TGATGCTGCGCATGATGGAGAATCCCATGG19091763AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT
Malus domestica genome assembly, chromosome: 12.
OU745002.1:19318241-19318262
TGATGCTGCGCATGATGGAGAATCCCATGG19318241AAATACTAACTTTGGCGAGTGGTTGGAAGGAAGAGAAGTGAGGAAGGCTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCACTCGCCAAAGTTAGTATTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTCGCCAAAGTTAGTATTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.359 | 0.350 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTCGCCAAAGTTAGTATTT&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=AAATACTAACTTTGGCGAGTGG&k=0&no_gap=0&offset=0&limit=47
0.497 | 0.006 | cgi_end;

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