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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-24 23:12:34, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Porphyra yezoensis cDNA, clone:PFL025f09_r, 5'end.
AU192094.1:125-144
CCAGGGGCGCCGCAGCAACAGCGGTTCGCG125CCACTTCCATCGCTGTCTTCGCTGGGCGTCGGTGGACCTGGCGGGCCCCG
Warburgia ugandensis isolate CL-2023a chromosome 5.
CP141130.1:32836918-32836937
TTGCCGAAATAAGGTTGTCAATCTTTTTGT32836918CCACTTCCATCGCTGTCTTCTTATCCTCCCTCTTACTGTGATCAGCATGC
Fraxinus pennsylvanica genome assembly, chromosome: 22.
OU503057.1:4232548-4232567
AAAGCTGCAGACCACACTCTCTCTGACACC4232548CCACTTCCATCGCTGTCTTCCTTTGCCCCAGGAAAAAAGAAAAAGATCAG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 7.
OZ077130.1:129608391-129608410
TGTTTTCAGCCACGACCCTCGCCTTCTGGG129608391CCACTTCCATCGCTGTCTTCATTGAGGCCAACTCCGCCTCTGATGCCATC
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 16.
OZ077139.1:95038115-95038134
CATTTTCTGCCATGTCCCTGGCCTTCTGAG95038115CCACTTCCATCGCTGTCTTCAAGGCGGCCAGTTCTACCTCCAATCTCTGA
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 17.
OZ077140.1:68523496-68523515
AATGTTTGGCCATTGTTTTTGCCAATTGGG68523496CCACTTCCATCGCTGTCTTCGCAGCAGCCAACTTTGCTTCCAGACGCTAA
3_Tms_b3v08.
OB792876.1:249112-249131
CGTTTGCCTCCAATATTGCCGGCGGCTTTT249112CCACTTCCATCGCTGTCTTCTGCCACGAGCTGCCGCATGAGATTGGTTAG
3_Tce_b3v08.
OC316806.1:290428-290447
CGTTTGCCTCCAATATTGCCGGCGGTTTTT290428CCACTTCCATCGCTGTCTTCTGCCACGAGCTGCCGCATGAGATTGGTTAG
Brachypalpus laphriformis genome assembly, chromosome: 1.
OX246753.1:232134295-232134314
CTTTCCAGGAGTGTGTTGTTCGCGTCTGAA232134295CCACTTCCATCGCTGTCTTCTTCGCTGATTCCTGGAACCCTTCTGTGATG
Sepiola atlantica genome assembly, chromosome: 39.
OY744553.1:4054233-4054252
AAGAAACGAATGCAAAAAACAACAGAATAT4054233CCACTTCCATCGCTGTCTTCGATGAAATTCTAAAAATCGATTTCTTCAGA
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 5.
OZ077128.1:135919596-135919615
TCAAAGACTGGAGGCGGAGCTGGCATCTAT135919596GAAGACAGCGATGGAAGTGGCTTAGAAGGCCTGAATTGTGGCTGAGAATG
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 7.
OZ077130.1:119102060-119102079
CCAGAAGCTAGAGGCATAGTTGACCGCTGT119102060GAAGACAGCGATGGAAGTGGCCCAAAAGGCGAGGGCCATGGTTGAGAATA
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 19.
OZ077142.1:73845671-73845690
TCATAGGTTGGTGGCAGAGCTGGCCGCTCT73845671GAAGACAGCGATGGAAGTGGCTCAGAAATGAGCTACGAGTGAACAGTCAG
Watersipora subatra genome assembly, chromosome: 7.
OY755164.1:44495016-44495035
TCTCACAGCCTTACCTGATATACGGAAGTC44495016GAAGACAGCGATGGAAGTGGCTCATACGCACAACGACTTCCTGCCTGATG
Placobdella costata genome assembly, chromosome: 17.
OZ194488.1:10946598-10946617
CCAACCAAATTCGTGTGGCAATTCGTGGCA10946598GAAGACAGCGATGGAAGTGGCCAGACCCGCCGTGTTCGAATTGGCGAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCACTTCCATCGCTGTCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTTCCATCGCTGTCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.133 | 0.124 | search_plus_done; http://172.18.8.135:50800/match?q=CCACTTCCATCGCTGTCTTC&k=0&no_gap=0&offset=0&limit=50
0.168 | 0.036 | search_minus_done; http://172.18.8.135:50800/match?q=GAAGACAGCGATGGAAGTGG&k=0&no_gap=0&offset=0&limit=40
0.172 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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