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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 21:21:20, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Elaeocarpus photiniifolius mRNA, contig: Ep_rep_c2616.
FX136511.1:59-80
AGAGCAAGAGTCAAACTTGAATATTGCACT59CCAGAATTCCATTGAAGATTGCTTACTGGAAATTGCCAAAGGGATTGGCGAT
Salix babylonica isolate Saba01F chromosome 13Ab.
CP161368.1:793101-793122
AGAGCAAGAAACAAATGTGAACATCTCACT793101CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTTTG
Salix babylonica isolate Saba01F chromosome 13Aa.
CP161406.1:1811125-1811146
AGAGCAAGAAACAAATGTGAACATCTCACT1811125CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGGGTAAGTTTG
Salix dunnii isolate FNU-M-1 chromosome 13b.
CP161433.1:619721-619742
AGAGCAAGAAACAAATGTGAACATCTCACT619721CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTATG
Salix dunnii isolate FNU-M-1 chromosome 13a.
CP161451.1:584719-584740
AGAGCAAGAAACAAATGTGAACATCTCACT584719CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTATG
Populus nigra genome assembly, chromosome: 12.
OX637683.1:610542-610563
AGAGCAAGAATCAAATTTGAACATCTCACT610542CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTTTG
Salix caprea genome assembly, chromosome: 12.
OZ037754.1:990895-990916
AGAGCAAGAAACAAATTTGAACATCTCACT990895CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTTTG
Populus tremula genome assembly, chromosome: 17.
OZ066598.1:539860-539881
AGAGCAAGAATCAAATTTGAACATCTCACT539860CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGGGTAAGTTTG
Staphylea pinnata genome assembly, chromosome: 5.
OZ233859.1:77100807-77100828
TGAGGAAGAATCGAACCTGAATATCTCACT77100807CCAGAATTCCATTGAAGATTGCTTACTTGAGATTGCCAAAGGGGTAAATTGG
Linum trigynum genome assembly, chromosome: 8.
OZ034821.1:28096953-28096974
TTAACTTACCCCCTTTGCAATTTCAAGCAA28096953GCAATCTTCAATGGAATTCTGGAGTGAGGCATTCAGGTCCAATTCCTGATCT
Salix repens genome assembly, chromosome: 14.
OZ253391.1:14794613-14794634
CAAACTTACTCCTTTAGCAATTTCAAGTAA14794613GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix repens genome assembly, chromosome: 4.
OZ253399.1:18843330-18843351
CAAACTTACTCCTTTAGCAATTTCAAGTAA18843330GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix cinerea genome assembly, chromosome: 10.
OZ253426.1:16314483-16314504
CAAACTTACTCCTTTAGCAATTTCAAGTAA16314483GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix herbacea genome assembly, chromosome: 3.
OZ286653.1:19168536-19168557
CAAACTTACTCCTTTAGCAATTTCAAGTAA19168536GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix viminalis genome assembly, chromosome: 11.
OZ287318.1:14400035-14400056
CAAACTTACTCCTTTAGCAATTTCAAGTAA14400035GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix viminalis genome assembly, chromosome: 11.
OZ287360.1:14048171-14048192
CAAACTTACTCCTTTAGCAATTTCAAGTAA14048171GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT
Salix reticulata genome assembly, chromosome: 9.
OZ287380.1:15931256-15931277
CAAACTTACTCCTTTAGCAATTTCAAGTAA15931256GCAATCTTCAATGGAATTCTGGAGTGAGATGTTCAAATTTGTTTCTTGCTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGAATTCCATTGAAGATTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAATTCCATTGAAGATTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.233 | 0.224 | search_plus_done; http://172.18.8.135:50900/match?q=CCAGAATTCCATTGAAGATTGC&k=0&no_gap=0&offset=0&limit=50
0.437 | 0.204 | search_minus_done; http://172.18.8.135:50900/match?q=GCAATCTTCAATGGAATTCTGG&k=0&no_gap=0&offset=0&limit=41
0.442 | 0.006 | cgi_end;

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