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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 10:48:58, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BR040494 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-010A03 5', mRNA sequence.
EX055850.1:28-48
ATAATTGTACCTCCCTAGTTGCTATAA28CCAGAGCTGAGCTACTTCTAATGTCCTTTCTTTAACAAGATGCTTTTGTCT
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:30012759-30012779
AAATTAATTGTACCTCCCTAGTTGCTATAA30012759CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica napus cultivar Xiang5A chromosome 3.
CP151898.1:30012802-30012822
AAATTAATTGTACCTCCCTAGTTGCTATAA30012802CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:59509616-59509636
AAATTAATTGTACCTCCCTAGTTGCTATAA59509616CCAGAGCTGAGCTACTTCTAATGTCTTTTTAACAGAGATGCTTGCGGTCTT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:30037707-30037727
AAATTAATTGTACCTCCCTAGTTGCTATAA30037707CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica napus genome assembly, chromosome: C07.
HG994371.1:53353736-53353756
AAATTAATTGTACCTCCCTAGTTGCTATAA53353736CCAGAGCTGAGCTACTTCTAATGTCTTTTTAACAGAGATGCTTGCGGTCTT
Brassica rapa genome, scaffold: A03.
LR031572.1:29828254-29828274
AAATTAATTGTACCTCCCTAGTTGCTATAA29828254CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:29889618-29889638
AAATTAATTGTACCTCCCTAGTTGCTATAA29889618CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica oleracea genome assembly, chromosome: 7.
OZ281600.1:57749653-57749673
AAATTAATTGTACCTCCCTAGTTGCTATAA57749653CCAGAGCTGAGCTACTTCTAATGTCTTTTTAACAGAGAGATGCTTTCGGCC
Brassica rapa subsp. trilocularis genome assembly, chromosome: 3.
OZ282417.1:29210718-29210738
AAATTAATTGTACCTCCCTAGTTGCTATAA29210718CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica oleracea var. botrytis genome assembly, chromosome: 7.
OZ282432.1:51751636-51751656
AAATTAATTGTACCTCCCTAGTTGCTATAA51751636CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAGAGAGATGCTTTCG
Brassica rapa subsp. narinosa genome assembly, chromosome: 3.
OZ282444.1:30606680-30606700
AAATTAATTGTACCTCCCTAGTTGCTATAA30606680CCAGAGCTGAGCTACTTCTAATGTCTTTTCTTTAACAAGATGCTTTTGTCT
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:2297445-2297465
AAGACCGCAAGCATCTCTGTTAAAAAGACA2297445TTAGAAGTAGCTCAGCTCTGGTTATAGCAACTAGGGAGGTACAATTAATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGAGCTGAGCTACTTCTAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAGCTGAGCTACTTCTAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.587 | 0.579 | search_plus_done; http://172.18.8.135:50900/match?q=CCAGAGCTGAGCTACTTCTAA&k=0&no_gap=0&offset=0&limit=50
0.913 | 0.326 | search_minus_done; http://172.18.8.135:50900/match?q=TTAGAAGTAGCTCAGCTCTGG&k=0&no_gap=0&offset=0&limit=38
0.914 | 0.001 | cgi_end;

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