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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:57:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Acomys russatus genome assembly, chromosome: 3.
LR877214.1:49629110-49629130
TGCTACAGTTCCAGGACAGGTTGCTAAGGG49629110CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAAAGGCCC
Acomys kempi genome assembly, chromosome: 5.
OU015359.1:95414559-95414579
TGCTACAGTTCCAGGACAGGTTGCTAGGGG95414559CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAAAGGCCC
Acomys percivali genome assembly, chromosome: 5.
OU015746.1:96520684-96520704
TGCTACAGTTCCAGGACAGGTTGCTAAGGG96520684CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAACGGCCC
Mobula hypostoma genome assembly, chromosome: 25.
OY992618.1:26301943-26301963
GGCCCATGCCCCATCTCCAGGCTTCTTGGC26301943CCCATTCTTCCTTCTGTTTCCTTACAACAAATATTGGGGTTTCAAATCTAA
Peromyscus eremicus genome assembly, chromosome: 22.
OX460415.1:16339776-16339796
CAGTATTGATTGAGGGCTCTACCAGAAGCA16339776GGAAACAGAAGGAAGAATGGGCTGGTGACTTTCAGGGTTCTGTTTGTAAGA
Peromyscus eremicus genome assembly, chromosome: 22.
OX460487.1:18178682-18178702
CGGTATTGATTGAGGGCTCTACCAGAAGCA18178682GGAAACAGAAGGAAGAATGGGCTGGTGACTTACAGGGTTCTGTTTGTAAGA
Polietes domitor genome assembly, chromosome: 1.
OX377618.1:81651051-81651071
GCCAAGATGTCCAACTAATGGAACCCACAA81651051GGAAACAGAAGGAAGAATGGGAATCCGAAGCAAGGATGGCAGACATGATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCATTCTTCCTTCTGTTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCATTCTTCCTTCTGTTTCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.214 | 0.205 | search_plus_done; http://172.18.8.135:50400/match?q=CCCATTCTTCCTTCTGTTTCC&k=0&no_gap=0&offset=0&limit=50
0.310 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAACAGAAGGAAGAATGGG&k=0&no_gap=0&offset=0&limit=46
0.313 | 0.002 | cgi_end;

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