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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:04:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

PEG001-C-004522-301 Non-Normalized Pedal-Pleural Ganglia Aplysia californica cDNA clone PEG001-C-004522 3', mRNA sequence.
EB196666.1:793-812
CCTTTCTTTAAAGTAGGTGCTTTTAACAAC793CCCCCATCAAACACAAATTCAGGTTCATTCCAGGAGGCAGGCCTCCAAAC
Tridacna gigas genome assembly, chromosome: 9.
OX244036.2:9541404-9541423
ATTTTCTCCTTTTCCTACTATGTTTTCTAC9541404CCCCCATCAAACACAAATTCCATCATTTAAGCCACATTTAAATTGTCGTC
Tridacna gigas genome assembly, chromosome: 14.
OX244041.2:27017153-27017172
ACATTTCCTCCTTTCCCTCAATGTTTTCTA27017153CCCCCATCAAACACAAATTCTATCATTAGAACCACATTTAAATTTTTGTC
Oxytorus armatus genome assembly, chromosome: 12.
OY253755.1:1456356-1456375
CACCGATAACAATCTCCGCTATCGGAACCT1456356CCCCCATCAAACACAAATTCGTGTCGCCGTATAATAACGAGACCAGTAAT
Xanthia icteritia genome assembly, chromosome: 8.
OX421938.2:19378918-19378937
ATCTGGAATTTCGTAACAACAACCCGTCTG19378918GAATTTGTGTTTGATGGGGGCAATAGGGTCACCCCCTATTACTACTACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCCATCAAACACAAATTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCATCAAACACAAATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.403 | 0.394 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCATCAAACACAAATTC&k=0&no_gap=0&offset=0&limit=50
0.507 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=GAATTTGTGTTTGATGGGGG&k=0&no_gap=0&offset=0&limit=46
0.508 | 0.001 | cgi_end;

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