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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:01:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium herbaceum isolate GPA1alz chromosome 10.
CP106701.1:1056496-1056521
ATCTATCCATTTTTTTCTTCAAGCTATTTT1056496CCCCTGTTTACGAGGCTATCTATTCTACTCTCGTGTCTTAACCATTTCATTTCATG
Gossypium rotundifolium isolate GPK201 chromosome 5.
CP106726.1:86858954-86858979
ATCCATCCATCTTTTTCTTCAAGCTATTTT86858954CCCCTGTTTACGAGGCTATCTATTCTACTCTTCTGTCTATCCCATTTCATTTCATG
Gossypium rotundifolium isolate GPK201 chromosome 8.
CP106729.1:120356776-120356801
ATCCATCCATCTTTTTCTTCAAGCTATTTT120356776CCCCTGTTTACGAGGCTATCTATTCTACTTTTCTATCTAAACCATTTCATTTCATG
Gossypium hirsutum chromosome 10 SNP marker NG0204310 associated with blue disease resistance genomic sequence.
GU265862.1:411-436
ATCCATCCATTTTTTTCTTCAAGCTATTTT411CCCCTGTTTACGAGGCTATCTATTCTACTCTTGTGTCTTAACCATTTCATTTCATG
Gossypium herbaceum isolate Zhongcao1 chromosome 10.
CP106689.1:118736187-118736212
CATGAAATGAAATGGTTAAGACACGAGAGT118736187AGAATAGATAGCCTCGTAAACAGGGGAAAATAGCTTGAAGAAAAAAATGGATGGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCTGTTTACGAGGCTATCTATTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCTGTTTACGAGGCTATCTATTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.214 | 0.205 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCTGTTTACGAGGCTATCTATTCT&k=0&no_gap=0&offset=0&limit=50
0.298 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=AGAATAGATAGCCTCGTAAACAGGGG&k=0&no_gap=0&offset=0&limit=46
0.300 | 0.002 | cgi_end;

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