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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:26:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nannobrachium achirus genome assembly, chromosome: 13.
OY997650.1:33396435-33396455
GAGTTTGTCTGTCAATCCCCGCCCTCCTCA33396435GGTGGAGACTGAAAAGAAGGGGGCGGGACTAAGCATGGAGAGAACTGTGAA
Arachis hypogaea DNA, clone: AHGS42L23.
DH961586.1:557-577
AGAAAGAGGGGAGAAGACAATGGTAGTAGT557GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis hypogaea DNA, clone: KICT07I10.
DH966673.1:174-194
AGAAAGAGGGGAGAAGACAATGGTAGTAGT174GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:9177053-9177073
AGAAAGAGGGGAGAAGACAATGGTAGTAGT9177053GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:9822823-9822843
AGAAAGAGGGGAGAAGACAATGGTAGTAGT9822823GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTTCTTTTCAGTCTCCACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTTCTTTTCAGTCTCCACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.310 | 0.302 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCTTTTCAGTCTCCACC&k=0&no_gap=0&offset=0&limit=50
0.434 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGGAGACTGAAAAGAAGGG&k=0&no_gap=0&offset=0&limit=50
0.437 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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