GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 00:37:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pm_0457 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869031.1:368-385
ACAGAACGGCGTCGTTGAAGAACGCAAAGA368CCGTAATAACCACCGTCCCTTCGGTAATCTAGGGATGAGGCCCGGAGG
Prunus mume strain hongmei clone P07 SSR marker genomic sequence.
GU458008.1:1-18
1CCGTAATAACCACCGTCCGCTCGCCCACGGTTTCGACCCGCTAGGACT
Prunus mume strain oushuku clone P08 SSR marker genomic sequence.
GU458009.1:1-18
1CCGTAATAACCACCGTCCGCTCGCCCATTGTTTCGACCCGCTAGGACT
Prunus americana strain kuhehonglian clone A27 SSR marker genomic sequence.
GU458028.1:1-18
1CCGTAATAACCACCGTCCGCTTTTCCTAGGTTTCGACCCGCTAGGACT
Prunus americana strain fangshanxiangbai clone A28 SSR marker genomic sequence.
GU458029.1:1-18
1CCGTAATAACCACCGTCCGCTTTATGTAGGTTTCGACCCGCTAGGACT
Anopheles cruzii genome assembly, chromosome: 3.
OX030880.1:63429425-63429442
CCGAGGGGGGTAATGGGAAAGGACACTGGA63429425CCGTAATAACCACCGTCCGCTGGAAAACGGAGCCTTTCTGCTTTAAAA
Beris morrisii genome assembly, chromosome: 3.
OX638312.1:62071505-62071522
GCTCCTTCGTGATAGGGCTTTAATTTGGTT62071505CCGTAATAACCACCGTCCGTACATGGCGGCGATGGGTCGAATTTAAGG
GOTZ6846.g1 GOTZ marine metagenome genomic, genomic survey sequence.
KG203240.1:79-96
ATAGGAAGGGATTAAAGATGGGTGAAGATA79GGACGGTGGTTATTACGGGGGGCGGGAAAGGCATCGGTGAAGCGGTAT
Sphinx pinastri genome assembly, chromosome: 22.
OX387636.1:13942121-13942138
AGATGCTGCCTTCGTGGACGTCATCCACAC13942121GGACGGTGGTTATTACGGCACTCCCGCTAACTCTGGCCATGCAGACTT
Stenodema calcarata genome assembly, chromosome: 16.
OY986063.1:5188531-5188548
CGCACACCCATTTCAATGCCAATCCATTAC5188531GGACGGTGGTTATTACGGGGTTTTTTTTCTGAGACTGTTTGAAAACCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGTAATAACCACCGTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTAATAACCACCGTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTAATAACCACCGTCC&k=0&no_gap=0&offset=0&limit=50
0.281 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=GGACGGTGGTTATTACGG&k=0&no_gap=0&offset=0&limit=43
0.284 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).