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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:04:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Cannabis sativa PK00387.1_1.CasaPuKu mRNA sequence.
JP449529.1:703-722
AAAAAGTTGAAGCTAAAGATGGAGAAATTG703CCTCAACCTGCCCTATTATGAGGAGCACCGGCTAGTACTTTAGTACTACT
Parietaria judaica genome assembly, chromosome: 3.
OX940862.1:2795090-2795109
ATCATGCGATGGGAAATCCAGCCAAACACT2795090CCTCAACCTGCCCTATTATGAAAATTTTGTCTTCCACGGGATAGAATATG
Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 chromosome.
CP034453.1:5351664-5351683
TGTCGTCGTCGAGGTCGGCTTCGGCTCGGG5351664CCTCAACCTGCCCTATTATGACGCCGCCAGGGTGGAGCGGCTGGTCGGCG
Mesorhizobium sp. 113-3-3 DNA, complete genome.
AP023243.1:3026319-3026338
TGCCGACCAGCCGCTCGACCCTGGCGGCGT3026319CATAATAGGGCAGGTTGAGGCCCGAGCCGAAGCCGACCTCGACGACGACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCAACCTGCCCTATTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCAACCTGCCCTATTATG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.344 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCAACCTGCCCTATTATG&k=0&no_gap=0&offset=0&limit=50
0.433 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CATAATAGGGCAGGTTGAGG&k=0&no_gap=0&offset=0&limit=47
0.433 | 0.001 | cgi_end;

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