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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:02:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:647600-647619
CATCTCCAAGTCGTTTAATGCACCAAAGAT647600CCTCTTGGCACGATAACACTTTCCAGTGTGGTATCCCTCGCTGCAGCGGC
Brassica napus genome assembly, chromosome: A01.
HG994355.1:616861-616880
CATCTCCAAGTCGTTTAATGCACCAAAGAT616861CCTCTTGGCACGATAACACTTTCCAGTGTGGTATCCCTCGCTGCAGCGGC
Brassica rapa genome, scaffold: A01.
LR031571.1:637787-637806
CATCTCCAAGTCGTTTAATGCACCAAAGAT637787CCTCTTGGCACGATAACACTTTCCAGTGTGGTATCCCTCGCTGCAGCGGC
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:637576-637595
CATCTCCAAGTCGTTTAATGCACCAAAGAT637576CCTCTTGGCACGATAACACTTTCCAGTGTGGTATCCCTCGCTGCAGCGGC
BR034536 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-052E11 5', mRNA sequence.
EX049892.1:642-661
GCCGCTGCAGCGAGGGATACCACACTGGAA642AGTGTTATCGTGCCAAGAGGATCTTTGGTGCATTAAACGACTTGGAGATG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB006J12, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC189204.2:125248-125267
GCCGCTGCAGCGAGGGATACCACACTGGAA125248AGTGTTATCGTGCCAAGAGGATCTTTGGTGCATTAAACGACTTGGAGATG
Brassica napus partial HLS1 gene for putative N-acetyltransferase hookless1, exons 1-3.
AJ251988.1:1459-1478
GCCGCTGCAGCGAGGGATACCACACTGGAA1459AGTGTTATCGTGCCAAGAGGATCTTTGGTGCATTAAACGACTTGGAGATG
Rutpela maculata genome assembly, chromosome: 2.
OW386286.2:222596123-222596142
AATGGTCTGTATTTAATCGCCTATAAACCG222596123AGTGTTATCGTGCCAAGAGGCCTACGAAACTGAAAATAGTTATCTCGATA
Acrobasis suavella genome assembly, chromosome: 14.
OW971942.1:10582612-10582631
AAAATAATTTACTCTAGAAAATTGTGACCA10582612AGTGTTATCGTGCCAAGAGGCTGGCCGCATTTCCGCGTTACATCGTTATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCTTGGCACGATAACACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCTTGGCACGATAACACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCTTGGCACGATAACACT&k=0&no_gap=0&offset=0&limit=50
0.212 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGTTATCGTGCCAAGAGG&k=0&no_gap=0&offset=0&limit=46
0.216 | 0.004 | cgi_end;

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