GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 15:56:03, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Meles meles genome assembly, chromosome: 2.
OV277442.1:88756007-88756026
AGTTCACAGACCTATCTGATATTGTCCTAC88756007CCTTCAAACCCTCTCCCTTCACTCTGTGGTCAAAGAATTAACTATAAAGA
Pipistrellus pygmaeus genome assembly, chromosome: 11.
OX465313.1:8685554-8685573
TGCAGCCTCCTCATAGCTCCCCCACTCTCG8685554CCTTCAAACCCTCTCCCTTCCACCCGGGAGCACAGGATATGGCATCGTTG
Myotis emarginatus genome assembly, chromosome: 7.
OZ220654.1:14577048-14577067
TTCTCGGTCTCTTTGCTTCTTTCTCCCAAT14577048CCTTCAAACCCTCTCCCTTCTGCTAATTAATAGTCCACTCTCTGTGTTTA
Solanum virginianum mRNA, clone: SmFL27G06, 5'end.
FS084792.1:50-69
CTTCAACAGCTCTTTCCCGTTCCATCACCA50CCTTCAAACCCTCTCCCTTCCAACCACGCGCCTCCTCTATTAACCCTCTC
Fagus sylvatica genome assembly, chromosome: 1.
OU015761.1:37646173-37646192
TCCATTTCTCATTAACCCACACCTCTCTCC37646173CCTTCAAACCCTCTCCCTTCATTTCCCCTCCTCTTGTCCTACGCCCTCTC
Fagus sylvatica genome assembly, chromosome: 1.
OZ125606.1:28374866-28374885
TCCATTTCTCATTAACCCACACCTCTCTCC28374866CCTTCAAACCCTCTCCCTTCATTTCCCCTCCTCTTGTCCTACGCCCTCTC
Ischnura elegans genome assembly, chromosome: 9.
OV121109.1:11320269-11320288
CGCAAATCGTCTTTTTAGCACCTCCTCTCT11320269CCTTCAAACCCTCTCCCTTCCACCTCCAAACCACATCCATTCCAATCCTT
Cydia fagiglandana genome assembly, chromosome: 9.
OY750799.1:4551365-4551384
TATAAAAACGGAACAAATGGAACACTTCTC4551365CCTTCAAACCCTCTCCCTTCTCCTCCTTTCTCCCTTCTCCCTCCTCCTCC
Sympetrum sanguineum genome assembly, chromosome: 1.
OZ078863.1:53884352-53884371
CCCATCAACCCTATCCCTTGCCACGCACGC53884352CCTTCAAACCCTCTCCCTTCCCACCCTCTCCCATGGTACCAAATCCCTTC
Sympetrum sanguineum genome assembly, chromosome: 5.
OZ078867.1:84986896-84986915
CCTTACCAACCTCTCTCATCCCTCCCTCTC84986896CCTTCAAACCCTCTCCCTTCCCCCCTTCCCAACCCCTCCAATCTCACCCT
Sympetrum sanguineum genome assembly, chromosome: 11.
OZ078873.1:34096578-34096597
CCTTCCCACCCTCCCCCTTCCCACCATCTC34096578CCTTCAAACCCTCTCCCTTCCCACCCTCTCCAATCCCACACTTTCCCTTC
Sympetrum sanguineum genome assembly, chromosome: 1.
OZ078875.1:49060837-49060856
CCCACCAACCCTATCCCTTGCCACGCACGC49060837CCTTCAAACCCTCTCCCTTCCCATCCCCTCCCTTACCACCCGCTCCCTTC
Sympetrum sanguineum genome assembly, chromosome: X.
OZ078882.1:37853503-37853522
CCTACCCACCCTGTACCATTCCACCCTCTC37853503CCTTCAAACCCTCTCCCTTCCCACCCCCTCCCTTCCCACCCTCACTCTAC
Scyliorhinus canicula genome assembly, chromosome: 5.
LR744034.1:112876351-112876370
CACCAACTCTCCATGCAGCCCCCAACCCTC112876351CCTTCAAACCCTCTCCCTTCAACCCTTTCTTCACACATCCCTCACACTAC
Chroicocephalus ridibundus genome assembly, chromosome: 9.
OZ001742.1:4496226-4496245
CTTTGTCCCACCTCCCCAACTCCTTCAGGC4496226CCTTCAAACCCTCTCCCTTCAGGCACACTCTCCCCAGCATCCTTTTCCCC
Pipistrellus pipistrellus genome assembly, chromosome: 11.
LR862367.1:63931161-63931180
CAACGATGCCATATCCTGTGCTCCCGGGTG63931161GAAGGGAGAGGGTTTGAAGGAGAGAGTGGGGAAGCTATGAGGAGGCTGCA
Myotis daubentonii genome assembly, chromosome: 8.
OY725367.1:80750085-80750104
TAAACACAGAGAGTGGACTAGTAATTAGCA80750085GAAGGGAGAGGGTTTGAAGGACTGGGAGAAGAAGCAAAGAGACCGAGAAG
Myotis nattereri genome assembly, chromosome: 8.
OZ125683.1:78411258-78411277
TAAACACAGAGAGTGGACTAGTAATTAGCA78411258GAAGGGAGAGGGTTTGAAGGACTGGGAGAAAGAAGCAAAGAGACCGAGAA
Pipistrellus hanaki genome assembly, chromosome: 11.
OZ203243.1:65781130-65781149
CAACGATGCCATATCCTGTGCTCCCGGGTG65781130GAAGGGAGAGGGTTTGAAGGAGAGAGTGGGGAAGCTATGAGGAGGCTGCA
Euglena gracilis isolate CCAP 1224/5Z chromosome 3.
CP154956.1:89660986-89661005
TCACAATACACAGGGGGGCGCGGTTTGAGG89660986GAAGGGAGAGGGTTTGAAGGAACAGGTCGCAAAACGGGAAATGCTAGAAA
Euglena gracilis isolate CCAP 1224/5Z chromosome 3.
CP154956.1:92027785-92027804
TCACAATACACAGGGGGGCGCGGTTTGAGG92027785GAAGGGAGAGGGTTTGAAGGAACAGGTCGCAAAACGGGAAATGCTAGAAA
Euglena gracilis isolate CCAP 1224/5Z chromosome 3.
CP154956.1:92151106-92151125
TCACAATACACAGGGGGGCGCGGTTTGAGG92151106GAAGGGAGAGGGTTTGAAGGAACAGGTCGCAAAACGGGAAATGCTAGAAA
Adonis annua genome assembly, chromosome: 14.
OZ123189.1:423755289-423755308
AGATACTTATGTTTTCTTAACTCCGACGAA423755289GAAGGGAGAGGGTTTGAAGGAGAGAAGAAACTCCGGCGAGGGTAAAGATG
Carex riparia genome assembly, chromosome: 21.
OZ206406.1:9423125-9423144
CTGGGATTTCTTCGTGGGTACAAGCTCCCA9423125GAAGGGAGAGGGTTTGAAGGACCGCTACTGGGGTTAGGATTCCTCGTTAT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:56885594-56885613
GAAGGGAGAGGTTGTGAAGGGAGAGGGTGG56885594GAAGGGAGAGGGTTTGAAGGGAGAGGGTGGGAGTGGAGAGTGTGGTAAGG
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:56886194-56886213
GAAGGGAGAGGGTTGGTAAGTATAGGGTGG56886194GAAGGGAGAGGGTTTGAAGGGAGAGGTTGTGAAGGGATATGTTGTGAAGT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:56886509-56886528
GAAGGGAGAGGGTTGGTAGGTAGAGGGTGG56886509GAAGGGAGAGGGTTTGAAGGTAGAGGGTGGGAAGGGAGAGGGTTGATAGG
Sympetrum striolatum genome assembly, chromosome: X.
OX388352.1:80454016-80454035
TTAGGGAGAGCGTGGTTAGGGAGAAGGTGG80454016GAAGGGAGAGGGTTTGAAGGGAAAGGGTGGATAGGGAGAGGGAGCGTAGG
Sympetrum striolatum genome assembly, chromosome: X.
OX388352.1:80454372-80454391
TTAGGGAGAGCGTGGTTAGGGAGAAGGTGG80454372GAAGGGAGAGGGTTTGAAGGGAAAGGGTGGATAGGGAGAGGGAGCGTAGG
Sepioteuthis lessoniana genome assembly, chromosome: 20.
OY757923.1:53498059-53498078
TCATTTCTAGAGATTCTGTTTTGCTCTCAA53498059GAAGGGAGAGGGTTTGAAGGTTAAGACGACGTCCCCACCTTGAAACATGT
Pyrausta purpuralis genome assembly, chromosome: 13.
OZ001655.1:12359141-12359160
AAGTTCCCACTCGTTCCTCTTGAGCCGGAA12359141GAAGGGAGAGGGTTTGAAGGTCATATTTTAGTTTTTTGTCACATATATTG
Sympetrum sanguineum genome assembly, chromosome: 5.
OZ078867.1:83509980-83509999
AGGGTGAGATTGGAGGGGTTGGGAAGGGGG83509980GAAGGGAGAGGGTTTGAAGGGAGAGGGAGGGATGAGAGAGGTTGGTAAGG
Sympetrum sanguineum genome assembly, chromosome: 11.
OZ078873.1:16556228-16556247
GGGAGCGGGTGGGACTGGAGCGGGTTGGAA16556228GAAGGGAGAGGGTTTGAAGGGAGCGGGTGGGAAGGGAGATGGTGGGAAGG
Sympetrum sanguineum genome assembly, chromosome: 5.
OZ078879.1:82236724-82236743
AGGGTGAGATTGGAGGGGTTGGGAAGGGGG82236724GAAGGGAGAGGGTTTGAAGGGAGAGGGAGGGATGAGAGAGGTTGGTAAGG
Sympetrum sanguineum genome assembly, chromosome: 6.
OZ078880.1:15540041-15540060
GAAGGGTGAGTGCTGAAAGGGAGAGGGTTT15540041GAAGGGAGAGGGTTTGAAGGAAGAGGGTGGGAAGGTAGAGGATGGGAAAG
Fringilla coelebs genome assembly, chromosome: 1.
OY740724.1:106716326-106716345
TTCTGTTTGACTTGTATATTAGTGATGGGT106716326GAAGGGAGAGGGTTTGAAGGGGTTTTTTGGGGTTGTTTTTTTTGTGTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTCAAACCCTCTCCCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCAAACCCTCTCCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.359 | search_plus_done; http://172.18.8.135:50800/match?q=CCTTCAAACCCTCTCCCTTC&k=0&no_gap=0&offset=0&limit=50
0.465 | 0.096 | search_minus_done; http://172.18.8.135:50800/match?q=GAAGGGAGAGGGTTTGAAGG&k=0&no_gap=0&offset=0&limit=35
0.479 | 0.014 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).