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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:49:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 1.
LR862380.1:80403693-80403712
TACCACATGGGGAACCGCTTGAGGCTTGGT80403693CCTTGGGCTCTTTCTCCTTCCCGAAGAAGGTAAACTTGGGTAAGTCCCTG
Avena sativa genome assembly, chromosome: 2C.
OU342386.1:111422309-111422328
GTTCCATGTCTTCATCCATGTCGCTTGATT111422309CCTTGGGCTCTTTCTCCTTCTTCCCTTTGCCCTTTCCGTGGGGTCTATTT
Avena sativa genome assembly, chromosome: 7C.
OU342391.1:297276132-297276151
GGTCCACGTCTTCATCCATATCGCTTGATT297276132CCTTGGGCTCTTTCTCCTTCTTCTTCCCTTTGCCCTTTCCGCGAGGTCTG
Avena eriantha genome assembly, chromosome: 6C.
OU342745.1:128162969-128162988
GGTCCGTGTCCTCATCCATATCACTTGATT128162969CCTTGGGCTCTTTCTCCTTCTTCCTCCCTTTGCCCTTTCCGCGAGGTCTG
Avena eriantha genome assembly, chromosome: 7C.
OU342746.1:94653923-94653942
GGTCCATGTCCTCATCCATATCACTTGATT94653923CCTTGGGCTCTTTCTCCTTCTTCTTCCCTTTGCGTTTTCCACGGGGTCTG
Avena sativa genome assembly, chromosome: 9.
OV702287.1:122794509-122794528
GTTCCATGTCTTCATCCATGTCGCTTGATT122794509CCTTGGGCTCTTTCTCCTTCTTCCCTTTGCCCTTTCCGTGGGGTCTATTT
Avena sativa genome assembly, chromosome: 14.
OV702292.1:320824042-320824061
GGTCCACGTCTTCATCCATATCGCTTGATT320824042CCTTGGGCTCTTTCTCCTTCTTCTTCCCTTTGCCCTTTCCGCGAGGTCTG
Mus musculus BAC clone RP24-104B17 from chromosome 9, complete sequence.
AC109831.5:23756-23775
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23756GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus BAC clone RP23-252J6 from chromosome 9, complete sequence.
AC161424.3:208957-208976
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA208957GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971566.1:23521257-23521276
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23521257GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971583.1:23572062-23572081
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23572062GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971604.1:23423214-23423233
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23423214GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus domesticus genome assembly, chromosome: 9.
OW971630.1:23087494-23087513
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23087494GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971646.1:23559480-23559499
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23559480GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus molossinus genome assembly, chromosome: 9.
OW971668.1:23748298-23748317
CTGTGTTTTTTCTTTCCTTCTCCCACTCCA23748298GAAGGAGAAAGAGCCCAAGGGAAAAAAAAGAATTTAAAGAAACAATAAAT
Mus spretus genome assembly, chromosome: 9.
OW971688.1:23920770-23920789
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23920770GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971717.1:23900812-23900831
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23900812GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971730.1:23611909-23611928
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23611909GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971751.1:23425330-23425349
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23425330GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus musculus genome assembly, chromosome: 9.
OW971772.1:23634837-23634856
CTGTGTTTTTTCTTTCCTTCTCCCACTCCA23634837GAAGGAGAAAGAGCCCAAGGGAAAAAAAAGAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971793.1:23604100-23604119
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23604100GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OW971814.1:23618007-23618026
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23618007GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus castaneus genome assembly, chromosome: 9.
OW971843.1:23510119-23510138
CTGTGTTTTTTCTTTCCTTCTCCCACTCCA23510119GAAGGAGAAAGAGCCCAAGGGAAAAAAAAAGAATTTAAAGAAACAATAAA
Mus musculus genome assembly, chromosome: 9.
OW971860.1:23535940-23535959
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA23535940GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OX389803.1:24030983-24031002
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA24030983GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OX390155.1:24017882-24017901
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA24017882GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Mus musculus genome assembly, chromosome: 9.
OX439025.1:31031624-31031643
CTGTGTTCTTTCTTTCCTTCTCCCACTCCA31031624GAAGGAGAAAGAGCCCAAGGGAAAAAAAATAATTTAAAGAAACAATAAAT
Pollachius pollachius genome assembly, chromosome: 13.
OX465136.1:11452018-11452037
TGAAAAGGATGATGATGATGGTGAAGAGGA11452018GAAGGAGAAAGAGCCCAAGGCCACGCAGGGAAAAAAGAAAGTGGATTTGC
Porphyra yezoensis cDNA, clone:PF025f08_r, 5'end.
AU188412.1:392-411
GCCGCCGCCCGCGCCGGCGCCGACGCCGGC392GAAGGAGAAAGAGCCCAAGGCGGACGGCGCCCCCGACTCGGCGGCCAAGC
Porphyra yezoensis cDNA, clone:PF031h05_r, 5'end.
AU188903.1:388-407
GCCGCCGCCCGCGCCGGCGCCGACGCCGGC388GAAGGAGAAAGAGCCCAAGGCGGACGGCGCCCCCGACTCGGCGGCCAAGC
Neopyropia yezoensis NyHSP110 mRNA for HSP110 protein, complete cds.
LC764587.1:2970-2989
GCCGCCGCCCGCGCCGGCGCCGACGCCGGC2970GAAGGAGAAAGAGCCCAAGGCGGACGGCGCCCCCGACTCGGCGGCCAAGC
Avena insularis genome assembly, chromosome: 2C.
OU342339.1:107907583-107907602
AAATAGACCCCACGGAAAGGGCAAAGGGAA107907583GAAGGAGAAAGAGCCCAAGGAATCAAGCGACATGGATGAAGACATGGAAC
Avena insularis genome assembly, chromosome: 2C.
OU342339.1:183988286-183988305
TAGACCCTGCAGAAAGGGCAAAGGGAAGAA183988286GAAGGAGAAAGAGCCCAAGGAATCAAGCGACATGGATGAAGATGTGGACC
Avena insularis genome assembly, chromosome: 4C.
OU342341.1:380167907-380167926
CCGACCCCGTGGAAAAGGCAAAGGGAAGAA380167907GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGGTGGAGACGTGGAAC
Avena insularis genome assembly, chromosome: 5C.
OU342342.1:253683007-253683026
CAGACCCCGCGGAATGGGCAAAGGGAAGAA253683007GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGATGAGTATGTGGACC
Avena insularis genome assembly, chromosome: 7C.
OU342344.1:279336420-279336439
CAGACCTCGCGGAAAGGGCAAAGGGAAGAA279336420GAAGGAGAAAGAGCCCAAGGAATCAAGCGATATGGATGAAGACGTGGACC
Avena sativa genome assembly, chromosome: 2C.
OU342386.1:170629200-170629219
TAGACCCTGCAGAAAGGGCAAAGGGAAGAA170629200GAAGGAGAAAGAGCCCAAGGAATCAAGCGACATGGATGAAGATGTGGACC
Avena sativa genome assembly, chromosome: 4C.
OU342388.1:446350553-446350572
CAGACCCCACGGAAAGGGCAAGAGGAAGAA446350553GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGATGAAGACGTGGACC
Avena sativa genome assembly, chromosome: 5C.
OU342389.1:254847697-254847716
GAACAGACCCCGCGGAAAGGGAAAATGGAA254847697GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGATGAGTATGTGGACC
Avena eriantha genome assembly, chromosome: 1C.
OU342740.1:161996922-161996941
CAGACCCCACGGAAAGGGCAAAGGGAAGAA161996922GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGACGAGGACATGGACC
Avena eriantha genome assembly, chromosome: 5C.
OU342744.1:303906229-303906248
TAGACCCCACGGAAAGGGCAAAGGGAAGAA303906229GAAGGAGAAAGAGCCCAAGGAATCAAGCGATATGGATGAAGACATGGACC
Avena sativa genome assembly, chromosome: 9.
OV702287.1:187461069-187461088
TAGACCCTGCAGAAAGGGCAAAGGGAAGAA187461069GAAGGAGAAAGAGCCCAAGGAATCAAGCGACATGGATGAAGATGTGGACC
Avena sativa genome assembly, chromosome: 11.
OV702289.1:464724351-464724370
CAGACCCCACGGAAAGGGCAAGAGGAAGAA464724351GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGATGAAGACGTGGACC
Avena sativa genome assembly, chromosome: 12.
OV702290.1:265744830-265744849
GAACAGACCCCGCGGAAAGGGAAAATGGAA265744830GAAGGAGAAAGAGCCCAAGGAATCAAGTGATATGGATGAGTATGTGGACC
Erynnis tages genome assembly, chromosome: 2.
LR990073.1:858775-858794
ATCATCAATCGATTACACCAAAGCAGAGAA858775GAAGGAGAAAGAGCCCAAGGAATCTAATGATGACCTGGGCTTCGATTTCT
Rhagium mordax genome assembly, chromosome: 8.
OY796663.1:52806478-52806497
GTCTATTTTGAAGAAGTTGTCGGAAGACAC52806478GAAGGAGAAAGAGCCCAAGGAACCCGCAATGCCGGAGAAGATAGACTCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTGGGCTCTTTCTCCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTGGGCTCTTTCTCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.174 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTGGGCTCTTTCTCCTTC&k=0&no_gap=0&offset=0&limit=50
0.326 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGAGAAAGAGCCCAAGG&k=0&no_gap=0&offset=0&limit=43
0.350 | 0.025 | cgi_end;

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