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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:00:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens clone RP11-617C4, WORKING DRAFT SEQUENCE, 36 unordered pieces.
AC084100.2:83282-83302
CTGTCCCTTCACTCTAGAAATGTCCCGAGG83282CCTTTGCTCCCTTCACCTCTCTCTCCACAAACTGTACTTGATTTTCTTTTC
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:22110455-22110475
ACTAATGGGTGTTGCTCCCTCCACCTCCAT22110455CCTTTGCTCCCTTCACCTCTCCATTCCACTTTTATCCCTCCTTTTATTTTT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:27163880-27163900
CTTTTCATAGATTTTTTTTTCCAGAGATTC27163880CCTTTGCTCCCTTCACCTCTCTCCAATAACAGACATATATATATATATATA
Human DNA sequence from clone RP13-129E14 on chromosome 9.
AL645768.7:13924-13944
GAAAAGAAAATCAAGTACAGTTTGTGGAGA13924GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Homo sapiens DNA, chromosome 9, nearly complete genome.
AP023469.1:135332530-135332550
GAAAAGAAAATCAAGTACAGTTTGTGGAGA135332530GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Homo sapiens isolate CHM13 chromosome 9.
CP068269.2:146966425-146966445
GAAAAGAAAATCAAGTACAGTTTGTGGAGA146966425GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Homo sapiens isolate NA24385 chromosome 9.
CP139512.1:140092812-140092832
GAAAAGAAAATCAAGTACAGTTTGTGGAGA140092812GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Homo sapiens isolate NA24385 chromosome 9.
CP139535.1:127804294-127804314
GAAAAGAAAATCAAGTACAGTTTGTGGAGA127804294GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2008504803-A/36390: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
FW548898.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2008504803-A/37716: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
FW550224.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2008504803-A/37717: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
FW550225.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Sequence 181 from Patent WO2009074968.
HB442312.1:103497-103517
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103497GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2011229522-A/36390: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
HW026112.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2011229522-A/37716: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
HW027438.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2011229522-A/37717: CELL-TYPE-SPECIFIC PATTERNS OF GENE EXPRESSION.
HW027439.1:103470-103490
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103470GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2014500723-A/13109: Polycomb-Associated Non-Coding RNAs.
LF205606.1:103867-103887
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103867GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
JP 2018138019-A/13109: Polycomb-Associated Non-Coding RNAs.
MA441183.1:103867-103887
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103867GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Sequence 13109 from patent US 10119144.
MM233950.1:103867-103887
GAAAAGAAAATCAAGTACAGTTTGTGGAGA103867GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Sequence 47825 from patent US 11001841.
MX786330.1:17-37
GTACAGTTTGTGGAGA17GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Eukaryotic synthetic construct chromosome 9.
CP034508.1:137627121-137627141
GAAAAGAAAATCAAGTACAGTTTGTGGAGA137627121GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Eukaryotic synthetic construct chromosome 9.
CP034533.1:137627121-137627141
GAAAAGAAAATCAAGTACAGTTTGTGGAGA137627121GAGAGGTGAAGGGAGCAAAGGCCTCGGGACATTTCTAGAGTGAAGGGACAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:28953606-28953626
TATATATATATATATATGTCTGTTATTGGA28953606GAGAGGTGAAGGGAGCAAAGGGAATCTCTGGAAAAAAAAATCTATGAAAAG
Triticum timopheevii genome assembly, chromosome: 2At.
OY997263.1:442446877-442446897
GTATATGGGTCTTATTGGGCCATAGTGGGA442446877GAGAGGTGAAGGGAGCAAAGGAGGGGGCGTGCCCCCCACGCCCAATCCGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTTGCTCCCTTCACCTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTTGCTCCCTTCACCTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTTGCTCCCTTCACCTCTC&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.360 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGGTGAAGGGAGCAAAGG&k=0&no_gap=0&offset=0&limit=47
0.475 | 0.013 | cgi_end;

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