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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:53:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES07G02, 5' end sequence.
FY384886.1:193-212
CCACCACCACCACCACCACCACTACAACGT193CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES08A22, 5' end sequence.
FY385145.1:243-262
CCACCACCACCACCACCACCACTACAACGT243CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES11_O15, 5' end sequence.
FY386606.1:149-168
CCACCACCACCACCACCACCACTACAACGT149CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES14O01, 5' end sequence.
FY387726.1:201-220
CCACCACCACCACCACCACCACTACAACGT201CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES19P14, 5' end sequence.
FY389649.1:221-240
CCACCACCACCACCACCACCACTACAACGT221CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES25_D22, 5' end sequence.
FY391629.1:189-208
CCACCACCACCACCACCACCACTACAACGT189CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
Dianthus caryophyllus mRNA, clone: CES30I19, 5' end sequence.
FY393619.1:248-267
CCACCACCACCACCACCACCACTACAACGT248CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.610.C1.
FX297765.1:247-266
CCACCACCACCACCACCACCACTACAACGT247CGTTACATTCCCCGTTATCGGTTTTTCACCAGCAGTATTTCGCCTGCAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGATAACGGGGAATGTAACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATAACGGGGAATGTAACG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CGATAACGGGGAATGTAACG&k=0&no_gap=0&offset=0&limit=50
0.754 | 0.569 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTACATTCCCCGTTATCG&k=0&no_gap=0&offset=0&limit=50
0.760 | 0.006 | cgi_end;

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