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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:34:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chanos chanos genome assembly, chromosome: 8.
LR697113.1:3824324-3824343
TCACTAAACCAGCTCTCTGGAACACCCCCC3824324CGATGAAGACGATGCTATTGTGTGTAAACAGTGTGTAATCCCTGTGTGTG
EST1071099 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT560459.1:100-119
CATTGATCTCGATGGTGAAGATTACGATGA100CGATGAAGACGATGCTATTGAAGAAGACGGTGAAGATGAAGATGAAGATG
UFL_433_89 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES822932.1:111-130
CATTGATCTCGATGGTGAAGATTACGATGA111CGATGAAGACGATGCTATTGAAGAAGACGGTGAAGATGAAGATGAAGATG
mhczaa0_028290.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_028290.z1, mRNA sequence.
JG837665.1:242-261
CATTGATCTCGACGGTGAAGATTACGATGA242CGATGAAGACGATGCTATTGAAGAAGACGATGAAGATGAAGATGAAGATG
mhczaa0_010358.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_010358.z1, mRNA sequence.
JG844774.1:247-266
CATTGATCTCGACGGTGAAGATTACGATGA247CGATGAAGACGATGCTATTGAAGAAGACGATGAAGATGAAGATGAAGATG
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:8403804-8403823
CATTGATCTCGATGGTGAAGATTACGATGA8403804CGATGAAGACGATGCTATTGAAGAAGACGATGAAGATGAAGATGAAGATG
Exobasidium cylindrosporum strain YG638 chromosome 3.
CP096880.1:874165-874184
CACATTGATCACTACGACATTATTTCTGCT874165CAATAGCATCGTCTTCATCGATGAGCTGTTTCTAGTTGCTACGCTGATTT
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:117252062-117252081
CATCTTCATCTTCATCTTCATCGTCTTCTT117252062CAATAGCATCGTCTTCATCGTCATCGTAATCTTCACCATCGAGATCAATG
Aegilops umbellulata cultivar TA1851 chromosome 2U.
CP136055.1:408474603-408474622
TCGTAGAGGTGTTTAGGTGAAGCCCTGCGT408474603CAATAGCATCGTCTTCATCGTCATCACGCCGTCGTGCTGACGGAACTCTC
Bradyrhizobium sp. A19 chromosome, complete genome.
CP088156.1:6975747-6975766
GGGCGGGAAGGGCCAGTTCTCGGTGGCCGG6975747CAATAGCATCGTCTTCATCGCCGGCCAGATCGAGGACCGCAATTGTCCGG
Ormia ochracea genome assembly, chromosome: 3.
OY727107.1:646825-646844
ATGTTTCTTTGTTTTGGGCTTCTCAAACTT646825CAATAGCATCGTCTTCATCGTCCGCCTCATTATCACTGTTTCCTAATACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGATGAAGACGATGCTATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATGAAGACGATGCTATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.460 | 0.451 | search_plus_done; http://172.18.8.135:50400/match?q=CGATGAAGACGATGCTATTG&k=0&no_gap=0&offset=0&limit=50
0.556 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=CAATAGCATCGTCTTCATCG&k=0&no_gap=0&offset=0&limit=44
0.559 | 0.004 | cgi_end;

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