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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:05:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus x bretschneideri Unigene54202_XinShao mRNA sequence.
JR643686.1:9-32
CTAGGACG9CGCCCTAACCCTATTTACTTCTGGTACCTTCTGCTCTCTCTCTCGCGGAGTAGC
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:19728320-19728343
AAATATTCATAAACGGGTTAGACTAGGACG19728320CGCCCTAACCCTATTTACTTCTGGTACCTTCTGCTCTCTCTCTCTCTCTCTCTC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:36640354-36640377
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA36640354CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:31709052-31709075
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA31709052CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCGAACCCGTTTATGAATATTT
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:35635817-35635840
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA35635817CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:36864375-36864398
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA36864375CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:36647256-36647279
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA36647256CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:36774116-36774139
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA36774116CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:36407854-36407877
GAGAGAGAGAGAGAGAGAGAGCAGAAGGTA36407854CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCTAACCCGTTTATGAATATTT
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:26400536-26400559
GAGAGAGAGAGAGAGGGGGAGCAGAAGGTA26400536CCAGAAGTAAATAGGGTTAGGGCGCGTCCTAGTCGAACCCGTTTATGAATAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCCCTAACCCTATTTACTTCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCCCTAACCCTATTTACTTCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.193 | 0.184 | search_plus_done; http://172.18.8.135:50400/match?q=CGCCCTAACCCTATTTACTTCTGG&k=0&no_gap=0&offset=0&limit=50
0.310 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGAAGTAAATAGGGTTAGGGCG&k=0&no_gap=0&offset=0&limit=48
0.316 | 0.005 | cgi_end;

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