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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:50:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Tachinus rufipes genome assembly, chromosome: 7.
OZ010747.1:22450802-22450821
TGTAACTACTCAAGTTGCACAAATTATGTT22450802CGTTTGTCAAGTTCATGTTGAACTTTGAACAATTTTGATCGCTGTGTCAG
Cylloceria caligata genome assembly, chromosome: 2.
OZ012704.1:76390093-76390112
CTTTACCCTGTACATGTTTGTCGGAGTGAA76390093CGTTTGTCAAGTTCATGTTGGGAGCGGCCTCGTACTAATTGATGGAAAGA
TSA: Pyrus x bretschneideri Unigene78268_XinShao mRNA sequence.
JR663209.1:288-307
TATAACATGTCAACCTATTCTATAAAGCAA288CAACATGAACTTGACAAACGACGACTCATAAATCAATCATTAAACGTAGC
TSA: Pyrus x bretschneideri Unigene78270_XinShao mRNA sequence.
JR663211.1:250-269
TATAACATGTCAACCTATTCTATAAAGCAA250CAACATGAACTTGACAAACGACGACTCATAAATCAATCATTAAACGTAGC
Phaedon cochleariae genome assembly, chromosome: 2.
OU896708.1:50444201-50444220
ATTATTTTTTGAGAATAACTTGCCCAAATC50444201CAACATGAACTTGACAAACGAATAGCAAACCATAAAAAGTTCAATCACGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTTTGTCAAGTTCATGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTTGTCAAGTTCATGTTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTTGTCAAGTTCATGTTG&k=0&no_gap=0&offset=0&limit=50
0.309 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=CAACATGAACTTGACAAACG&k=0&no_gap=0&offset=0&limit=48
0.311 | 0.002 | cgi_end;

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