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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 08:18:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Peromyscus eremicus genome assembly, chromosome: 3.
OX460396.1:29815502-29815521
TAAGGGTTATGAAGATAGAAAAGGATTAGC29815502CTAAGGAAGAGTAGAGAGCACAATTTGTTCAGAGGGAATTGGGTTTGATT
Peromyscus eremicus genome assembly, chromosome: 3.
OX460468.1:30373621-30373640
TAAGGGTTATGAAGATAGAAAAGGATTAGC30373621CTAAGGAAGAGTAGAGAGCACAATTTGTTCAGAGGGAATTGGGTTTGATT
Citrus reshni microsatellite DNA, locus mCrCIR03F05.
FR692364.1:67-86
CTCAAGGACATAACAAAAAATTAGAAATTT67CTAAGGAAGAGTAGAGAGCACTGTAACAAACAACATGATAAACACTGTGT
Citrus reshni microsatellite DNA, locus mCrCIR04A11.
FR692366.1:67-86
CTCAAGGACATAACAAAAAATTAGAAATTT67CTAAGGAAGAGTAGAGAGCACTGTAACAAACAACATGATAAACACTGTGT
Arvicola amphibius genome assembly, chromosome: 12.
LR862392.2:17530996-17531015
TCTTTCTCCCATGTACTCACCTCTATTTTG17530996TGCTCTCTACTCTTCCTTAGAAAGTGCTATATAGCAGTAAATGCCATGTT
Chionomys nivalis genome assembly, chromosome: 5.
OX465453.1:17641823-17641842
TCCTTCTCCTCTATACCCACCTCTATTTTG17641823TGCTCTCTACTCTTCCTTAGAAAGTGCTATATAGCAGTAAATGCCTTGTT
QM0AAA7AH09FM1 CCL1 Citrus clementina genomic clone CCL005O17, genomic survey sequence.
ET072636.1:440-459
ACACAGTGTTTATCATGTTGTTTGTTACAG440TGCTCTCTACTCTTCCTTAGAAATTTCTAATTTTTTGTTATGTCCTTGAG
Citrus sinensis genome assembly, chromosome: 8.
OY754325.1:1695128-1695147
ACACAGTGTTTATCATGTTGTTTGTTACAG1695128TGCTCTCTACTCTTCCTTAGAAATTTCTAATTTTTTGTTATGTCCTTGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAAGGAAGAGTAGAGAGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAAGGAAGAGTAGAGAGCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.341 | 0.332 | search_plus_done; http://172.18.8.135:50400/match?q=CTAAGGAAGAGTAGAGAGCA&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTCTCTACTCTTCCTTAG&k=0&no_gap=0&offset=0&limit=46
0.473 | 0.003 | cgi_end;

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