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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:51:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Rattus norvegicus clone CH230-362C11, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC119635.7:85472-85490
AGATTCTTAATAGTTGTAAAATGGAGCCTT85472CTAGGGTTGAGGGCAAACTCCATGCACCCAACTAATGCCTGAGTTTTCA
Chorisops tibialis genome assembly, chromosome: 1.
OY770262.1:281358551-281358569
GACCGTTTATATTTCACTGTACGAGTAGGA281358551CTAGGGTTGAGGGCAAACTCGTGCGCACGTTTAGCTTGACGAGTATTTC
Humulus lupulus genome assembly, chromosome: 2.
OY720648.1:118408967-118408985
TTTATACAAATTCTTAAAAACTAAAAGACT118408967AGTTTGCCCTCAACCCTAGCTTTCCCATTATTAGGTTCAAGTCCTTTTA
Halichondria panicea genome assembly, chromosome: 12.
OY776071.1:4811306-4811324
TGTTAATTCTGCCTCTGTTTCGTGTCCGTG4811306AGTTTGCCCTCAACCCTAGCACATGCAGTTAAAACCATTGAAACTTTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTAGGGTTGAGGGCAAACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAGGGTTGAGGGCAAACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=CTAGGGTTGAGGGCAAACT&k=0&no_gap=0&offset=0&limit=50
0.264 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTTGCCCTCAACCCTAG&k=0&no_gap=0&offset=0&limit=48
0.265 | 0.002 | cgi_end;

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