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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 05:11:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

oeh32g11.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ022979.1:652-671
TCCACGGCTGCATCCGAAGGCAGGCGTTTA652CTCCGGACCGTATCTATCTACCTCACTCTCGAAAAAAAAAACCAGGAAGN
lky33b02.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ061723.1:124-143
TCCACGGCTGCATCCGAAGGCAGGCGTTTA124CTCCGGACCGTATCTATCTACCTCACTCTCGAAAAAAAAAACCAGGAAGA
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:54248145-54248164
TCCACGGCTGCATCCGAAGGCAGGCGTTTA54248145CTCCGGACCGTATCTATCTACCTCACTCTCGAAAAAAAAAACCAGGAAGA
Brassica napus genome assembly, chromosome: C06.
HG994370.1:48289705-48289724
TCCACGGCTGCATCCGAAGGCAGGCGTTTA48289705CTCCGGACCGTATCTATCTACCTCACTCTCGAAAAAAAAAACCAGGAAGA
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:210145471-210145490
GTGACGAAAGTTTAATATTCTGTCGTTTGG210145471TAGATAGATACGGTCCGGAGGGCGTGGCCACGCCCCCGGGCCGTAACTAC
Brassica rapa subsp. pekinensis clone KBrB096A21, complete sequence.
CU695272.1:110779-110798
TTCTTCCTGTTTTTTTTTCCGAGAGTGAGG110779TAGATAGATACGGTCCGGAGTAAAAATAGTGCTACCTCTTCATCACATGT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB033O04, complete sequence.
AC189307.2:2323-2342
TTCTTCCTGTTTTTTTTTCCGAGAGTGAGG2323TAGATAGATACGGTCCGGAGTAAAAATAGTGCTACCTCTTCATCACATGT
Papaver somniferum cultivar Roxanne chromosome 1.
CP048213.1:199526836-199526855
AGATTCTTTAGTTCCTTCCAAGGTTTTGCG199526836TAGATAGATACGGTCCGGAGTAAAGGTTTTGTGGGTACATCTCTGGTAAC
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:25333106-25333125
TCTTCCTGTTTTTTTTTTCCGAGAGTGAGG25333106TAGATAGATACGGTCCGGAGTAAACGCCTGCCTTTGGATTCAGCCGTGGA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:19814295-19814314
TCTTCTTCCTGTTTTTTTCCGACAGCGAGG19814295TAGATAGATACGGTCCGGAGTAACGGTTAATGTTTGTTTCTGCCGCTGCT
Brassica rapa genome, scaffold: A04.
LR031576.1:18406535-18406554
TTCCTGTTTTTTTTTTTTCCGAGAGAGAGG18406535TAGATAGATACGGTCCGGAGTAAACGCCTGCCTTTGGATTCAGCCGTGGA
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:18829098-18829117
TTCCTGTTTTTTTTTTTTCCGAGAGAGAGG18829098TAGATAGATACGGTCCGGAGTAAACGCCTGCCTTTGGATTCAGCCGTGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCGGACCGTATCTATCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCGGACCGTATCTATCTA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.304 | 0.296 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCGGACCGTATCTATCTA&k=0&no_gap=0&offset=0&limit=50
0.408 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=TAGATAGATACGGTCCGGAG&k=0&no_gap=0&offset=0&limit=46
0.413 | 0.005 | cgi_end;

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