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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:24:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Cannabis sativa PK19289.1_1.CasaPuKu mRNA sequence.
JP450038.1:99-118
GACAGTCATGGCCAAAAACACTCTAGACTC99CTCCTCCTCAAAACGACACTTCCACTGGACCAAGAAGGTCGGACACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq1.
LA670395.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq2.
LA670396.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq3.
LA670397.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq4.
LA670398.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq5.
LA670399.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq6.
LA670400.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq7.
LA670401.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq8.
LA670402.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq12.
LA670405.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq13.
LA670406.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq14.
LA670407.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq15.
LA670408.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq16.
LA670409.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq17.
LA670410.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq18.
LA670411.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq19.
LA670412.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq20.
LA670413.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq21.
LA670414.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq22.
LA670415.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq23.
LA670416.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq25.
LA670417.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq26.
LA670418.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq27.
LA670419.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq28.
LA670420.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq29.
LA670421.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq30.
LA670422.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq31.
LA670423.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq32.
LA670424.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq33.
LA670425.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq36.
LA670426.1:1313-1332
GACAGTCATGGCCAAAAACAATCTAGACTC1313CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq37.
LA670427.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq38.
LA670428.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq40.
LA670429.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq41.
LA670430.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq42.
LA670431.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq43.
LA670432.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
TSA: Humulus lupulus var. lupulus mRNA, contig: comp296140_c0_seq46.
LA670433.1:1298-1317
GACAGTCATGGCCAAAAACAATCTAGACTC1298CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG
Humulus lupulus genome assembly, chromosome: 4.
OY720651.1:137682033-137682052
GACAGTCATGGCCAAAAACAATCTAGACTC137682033CTCCTCCTCAAAACGACACTTCCACTGGACGAAGAAGGTCGGAAACGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTCCTCAAAACGACACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTCCTCAAAACGACACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.927 | 0.918 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTCCTCAAAACGACACT&k=0&no_gap=0&offset=0&limit=50
1.030 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGTCGTTTTGAGGAGGAG&k=0&no_gap=0&offset=0&limit=11
1.030 | 0.000 | cgi_end;

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