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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:06:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 1782 from patent US 8067671.
GY534844.1:3019-3040
CCATCGAGAAACTTTTCTTAGTAATTCCCA3019CTCCTCTTCATCTCAATCAATCCACCTTAATTGGCCGGCACGTTGCGTTGTT
Sequence 1782 from patent US 8088976.
GY862279.1:3019-3040
CCATCGAGAAACTTTTCTTAGTAATTCCCA3019CTCCTCTTCATCTCAATCAATCCACCTTAATTGGCCGGCACGTTGCGTTGTT
TSA: Cajanus cajan cultivar UPAS 120 contig23180.UPAS mRNA sequence.
EZ640897.1:864-885
GCCAAGGTCGTTTTAGGCCCCACATCCATC864CTCCTCTTCATCTCAATCAATCCCCTTTATTTTTTCTTTTCTCTTTCTCTTT
TSA: Cajanus cajan cultivar Asha contig11709.Asha mRNA sequence.
EZ659573.1:287-308
GCCAAGGTCGTTTTAGGCCCCACATCCATC287CTCCTCTTCATCTCAATCAATCCCCTTTATTTTTTTCTTTTCTCTTTCTCTT
Heterodera glycines isolate TN10 chromosome 4.
CP049708.1:978380-978401
CCCTCGAGAAACTTTTCTTAGTAATTCCCA978380CTCCTCTTCATCTCAATCAATCCACCTTAATTGGTCGGCACGTTGCGTTGTT
Sequence 75931 from patent US 8067671.
GY608993.1:626-647
AACAACGCAACGTGCCGGCCAATTAAGGTG626GATTGATTGAGATGAAGAGGAGTGGGAATTACTAAGAAAAGTTTCTCGATGG
Sequence 75931 from patent US 8088976.
GY936428.1:626-647
AACAACGCAACGTGCCGGCCAATTAAGGTG626GATTGATTGAGATGAAGAGGAGTGGGAATTACTAAGAAAAGTTTCTCGATGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCCTCTTCATCTCAATCAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCCTCTTCATCTCAATCAATC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.228 | 0.219 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCTCTTCATCTCAATCAATC&k=0&no_gap=0&offset=0&limit=50
0.364 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=GATTGATTGAGATGAAGAGGAG&k=0&no_gap=0&offset=0&limit=45
0.365 | 0.002 | cgi_end;

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