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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:48:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

USDA-FP_125000-656 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_F04 5', mRNA sequence.
CF510141.1:119-138
GTGCATACACCTATGAGGAGCTTGAGAGGG119AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CGF1004259_F07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_F07 5', mRNA sequence.
CK934391.1:152-171
GTGCATACACCTATGAGGAGCTTGAGAGGG152AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
UCRCS07_5F11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-5F11-L21-1-6.g, mRNA sequence.
CX046078.1:107-126
GTGCATACACCTATGAGGAGCTTGAGAGGG107AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-100-012-E04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY650574.1:140-159
GTGCATACACCTATGAGGAGCTTGAGAGGG140AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-100-020-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY651310.1:93-112
GTGCATACACCTATGAGGAGCTTGAGAGGG93AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-100-123-D04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY656671.1:121-140
GTGCATACACCTATGAGGAGCTTGAGAGGG121AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-100-125-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY657908.1:113-132
GTGCATACACCTATGAGGAGCTTGAGAGGG113AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-101-014-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY659755.1:142-161
GTGCATACACCTATGAGGAGCTTGAGAGGG142AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-101-024-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY660619.1:116-135
GTGCATACACCTATGAGGAGCTTGAGAGGG116AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-101-029-E02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661104.1:117-136
GTGCATACACCTATGAGGAGCTTGAGAGGG117AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C1-101-059-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY663770.1:123-142
GTGCATACACCTATGAGGAGCTTGAGAGGG123AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C3-701-097-D12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY710319.1:122-141
GTGCATACACCTATGAGGAGCTTGAGAGGG122AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C3-701-097-F11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY710342.1:80-99
GTGCATACACCTATGAGGAGCTTGAGAGGG80AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C3-702-031-F04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY713495.1:15-34
CCACGCGTCCGGGG15AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C3-705-071-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
EY742482.1:129-148
GTGCATACACCTATGAGGAGCTTGAGAGGG129AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS00-C5-003-081-F11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY749961.1:132-151
GTGCATACACCTATGAGGAGCTTGAGAGGG132AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
CS12-C1-001-008-F05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
EY753936.1:120-139
GTGCATACACCTATGAGGAGCTTGAGAGGG120AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
C31402G04EF CTVClemen1 Citrus clementina cDNA clone C31402G04, mRNA sequence.
FC875330.1:149-168
GTGCATACACCTATGAGGAGCTTGAGAGGG149AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGT
SCASC2NG_T3_029_F03_20DEC2006_021 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence.
JG638124.1:119-138
GTGAGTACACTTACGCTGATTTGGTGAGGG119AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGT
SCASC2NG_T3_034_G10_20DEC2006_068 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence.
JG638602.1:125-144
GTGAGTACACTTACGCTGATTTGGTGAGGG125AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGT
SCASC2NG_T3_043_E03_20DEC2006_023 SCASC2NG cell culture from Sanguinaria canadensis Sanguinaria canadensis cDNA, mRNA sequence.
JG639409.1:124-143
GTGAGTACACTTACGCTGATTTGGTGAGGG124AACCTTACTGGCCTTCCGAGAAGCTCCGAATTTCGATCACTGGGGCTGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCGGAAGGCCAGTAAGGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCGGAAGGCCAGTAAGGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=CTCGGAAGGCCAGTAAGGTT&k=0&no_gap=0&offset=0&limit=50
1.503 | 1.335 | search_minus_done; http://172.18.8.135:50400/match?q=AACCTTACTGGCCTTCCGAG&k=0&no_gap=0&offset=0&limit=50
1.518 | 0.014 | cgi_end;

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