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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:01:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

CV01024A2B08.f1 CV01-normalized library Manihot esculenta cDNA clone CV01024A2B08.f1, mRNA sequence.
DV448286.1:297-319
GAGAGCAATGTTTCTGTTAAAGAGGAAATA297CTCTTGGCTGAATCCGACGACAAAGCGAGTGAAGAGCCAGCTCTTCTCGCATC
CV02027A1A01.f1 CV02-normalized library Manihot esculenta cDNA clone CV02027A1A01.f1, mRNA sequence.
DV458340.1:416-438
GAGAGCAATGTTTCTGTTAAAGAGGAAATA416CTCTTGGCTGAATCCGACGACAAAGCGAGTGAAGAGCCAGCTCTTCTCGCATC
CASRF46TF CASR Manihot esculenta cDNA 5', mRNA sequence.
FF535611.1:150-172
GAGAGCAATGTTTCTGTTAAAGAGGAAATA150CTCTTGGCTGAATCCGACGACAAAGCGAGTGAAGAGCCAGCTCTTCTCGCATC
K022B08 Cassava root 210-day-old plants cDNA library Manihot esculenta cDNA, mRNA sequence.
FG805357.1:177-199
GAGAGCAATGTTTCTGTTAAAGAGGAAATA177CTCTTGGCTGAATCCGACGACAAAGCGAGTGAAGAGCCAGCTCTTCTCGCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTCTTGGCTGAATCCGACGACAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTTGGCTGAATCCGACGACAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.356 | 0.347 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTTGGCTGAATCCGACGACAA&k=0&no_gap=0&offset=0&limit=50
0.440 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=TTGTCGTCGGATTCAGCCAAGAG&k=0&no_gap=0&offset=0&limit=46
0.440 | 0.000 | cgi_end;

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