GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-10 08:12:39, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

uncultured Spirochaetota bacterium isolate ENR-C_bin.1443 genome assembly, chromosome: 1.
OW818666.1:3777436-3777454
TTATAGTAAGTACTGATAGATTGCTTTTTA3777436CTGAGTCACAGACGCGGTTCAGATAGAATGACACCGGTTTATGAGCCAT
Porphyra yezoensis cDNA, clone:PFL056h07_r, 5'end.
AU194221.1:56-74
CCGCTACTGCCGCCGCTGCGGCGGCTGCGG56CTGAGTCACAGACGCGGTTACAGCAGCAGCAGCAGTAGCAGCAGCATCA
Anthocharis cardamines genome assembly, chromosome: 15.
FR989965.1:9765824-9765842
TCGAACCCAGGACCTCTGGTTTGCATACCA9765824CTGAGTCACAGACGCGGTTAAATCAATTGTTAATTTAGTCTTATTAAAC
Diabrotica virgifera virgifera genome assembly, chromosome: 5.
OU830628.1:65743548-65743566
ATTTTGATCCAAAGGTAGACGCTCTTACCA65743548CTGAGTCACAGACGCGGTTGATATCATCATTAAAATTAATGTACATATG
Donax trunculus genome assembly, chromosome: 10.
OZ187430.1:42282843-42282861
AACGACGTTAAATAATAATGACCCTATCAA42282843CTGAGTCACAGACGCGGTTGCTGACAATTAAGGTAGTCTAGGTACTCAA
Donax trunculus genome assembly, chromosome: 13.
OZ187433.1:45684074-45684092
CGCCCCCCGTGACCCCCGGTTCCTACGGCC45684074CTGAGTCACAGACGCGGTTGCTGGTCAGGATCTTCACTTTTCGAATCTG
Donax trunculus genome assembly, chromosome: 15.
OZ187435.2:17101822-17101840
TTGTAAAAAGGCGATGCTTCAGACCAACAC17101822CTGAGTCACAGACGCGGTTGTTGGTCAAGATCTTCACTTTTCGAAAATG
Donax variegatus genome assembly, chromosome: 2.
OZ207834.1:6000806-6000824
GTATCAAAAAGTGTTAATCCTGACCAACAA6000806CTGAGTCACAGACGCGGTTGCTGGTCAGGATCAGTGTTTTTCGAAAATG
Donax variegatus genome assembly, chromosome: 6.
OZ207838.1:78830257-78830275
TTGTCAAAAAGTGTTAATCCGGACTAACAA78830257CTGAGTCACAGACGCGGTTAATGGTCAGGATAAGCATTTTTCGAAAATG
Donax variegatus genome assembly, chromosome: 14.
OZ207846.1:66461080-66461098
TTGTCAGAAAGCGTTAATCCTGACAAAAAC66461080CTGAGTCACAGACGCGGTTGCTCATCGGGAGTAACACTTTTCGAAACTG
Donax semistriatus genome assembly, chromosome: 1.
OZ250635.1:82658088-82658106
GTGTTAAAAAGTTGTGATCCTGATCAACAA82658088CTGAGTCACAGACGCGGTTGCTGATCAGGATACCATTTTACTGACTTAA
Donax semistriatus genome assembly, chromosome: 2.
OZ250636.1:55562266-55562284
GTGTCAAAAAGTGTTAATCCCGACCAACAA55562266CTGAGTCACAGACGCGGTTGCTGGTTGGGATCAACACGTTTGGAAAATG
Donax semistriatus genome assembly, chromosome: 4.
OZ250638.1:34130736-34130754
TTTTAATAAAGTGAAGATCCTAATAAGCAA34130736CTGAGTCACAGACGCGGTTGCTGTTCAGAGTCATCACTTTGCGATACAT
Donax semistriatus genome assembly, chromosome: 8.
OZ250642.1:18561172-18561190
GTGTCAAAAAGTGTTAATTTCAACCAACAG18561172CTGAGTCACAGACGCGGTTGCTGGTCTTGATCAACACTTGAAAATGTCC
Donax semistriatus genome assembly, chromosome: 16.
OZ250650.1:23876043-23876061
GTGTCAAAAAGTATTAATCCCGACCAACAA23876043CTGAGTCACAGACGCGGTTGCTGGTTGGGAACAACATTTTTTGAAAATG
Donax semistriatus genome assembly, chromosome: 17.
OZ250651.1:20933402-20933420
GTATCAAAATGTGCAGATATTTACCAACAA20933402CTGAGTCACAGACGCGGTTGCTGGTAAATATCAATACCTTTCTTAAGTG
Blastomussa wellsi genome assembly, chromosome: 5.
OX393565.1:25700307-25700325
TTTTGATGTCATGAAATTGGGTCGATTGGA25700307AACCGCGTCTGTGACTCAGTAGACATCCCAGGTTCCCTTTAAGTAAGGG
Cetonia aurata genome assembly, chromosome: 1.
OX421882.1:55894528-55894546
GCATCCATCATGGCCGTCTATATAATACCA55894528AACCGCGTCTGTGACTCAGGATGTGGTAAACTCGGCGAATTTAGCGGGA
Donax trunculus genome assembly, chromosome: 4.
OZ187424.1:86040255-86040273
CATTTTCTTAAATGTTTGATCCTGACTAAG86040255AACCGCGTCTGTGACTCAGTTACAGGGCCCCGTCTTATCAAACTTCGTA
Donax trunculus genome assembly, chromosome: 11.
OZ187431.1:3034884-3034902
TATTTTCGAAAAGTGTTTACCCTGATCAGC3034884AACCGCGTCTGTGACTCAGGATACCAATCAAATGCAGATATACATGTAA
Donax variegatus genome assembly, chromosome: 7.
OZ207839.1:65243931-65243949
CAATTTCGAAAAATGCTGATCCTGACCAGC65243931AACCGCGTCTGTGACTCAGGATTACAGTACCAGGATCGTATAAGTTATC
Donax variegatus genome assembly, chromosome: 18.
OZ207850.1:7935233-7935251
AATTTCGAAAAATTGCTGATCCTGACCAGC7935233AACCGCGTCTGTGACTCAGTTGTTGGTCAAAATTAACATTTTGACACTT
Donax semistriatus genome assembly, chromosome: 14.
OZ250648.1:55581993-55582011
ACGTTTGAAAATGTTTGGATCCTGACTTGC55581993AACCGCGTCTGTGACTCAGTTAAAAATCAGGATAACTTATTCACCTAGA
Donax semistriatus genome assembly, chromosome: 17.
OZ250651.1:850052-850070
ACTTTTGAAAAAGTGAAGATCCTAATCAGA850052AACCGCGTCTGTGACTCAGTTGTTGATCAGGGTATTCACTTTTTAACGC
Donax semistriatus genome assembly, chromosome: 18.
OZ250652.1:36669946-36669964
GCTTTTGTAAAAGTGAAACCCCTGATCAGC36669946AACCGCGTCTGTGACTCAGTTGTTAATCAGAATCTACACTATGATAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTGAGTCACAGACGCGGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAGTCACAGACGCGGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.379 | 0.370 | search_plus_done; http://172.18.8.135:50900/match?q=CTGAGTCACAGACGCGGTT&k=0&no_gap=0&offset=0&limit=50
0.541 | 0.162 | search_minus_done; http://172.18.8.135:50900/match?q=AACCGCGTCTGTGACTCAG&k=0&no_gap=0&offset=0&limit=34
0.547 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).