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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 16:25:53, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RGUS1306 Cherry differentially expressed Prunus avium x P. cerasus x P. canescens cDNA clone RGUS1306, mRNA sequence.
DV175422.1:93-112
GCATGGATCTCCAATGGCCTTCCCCATGAG93CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus dulcis DNA, pseudomolecule Pd02.
AP019298.1:17543289-17543308
GCATGGATCTCCAATGGCCTTCCCCATGAG17543289CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus speciosa IZO01 DNA, chromosome 2, sequence.
AP029590.1:31873999-31874018
GCATGGATCTCCAATGGCCTTCCCCATGAG31873999CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus speciosa IZO01 DNA, chromosome 2.
AP038356.1:31226542-31226561
GCATGGATCTCCAATGGCCTTCCCCATGAG31226542CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus speciosa IZO01 DNA, chromosome 2.
AP038364.1:28668193-28668212
GCATGGATCTCCAATGGCCTTCCCCATGAG28668193CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Rosa rugosa genome assembly, chromosome: 6.
OY288196.1:40167743-40167762
GCAAGGATCTCCAATGGCCTTCACCATGAG40167743CTTCAATATACTTGGTGAGCAATGTGTCCTCTCTGGGAGTCCATGGACCT
Potentilla sterilis genome assembly, chromosome: 13.
OY821766.1:31937942-31937961
GCAAGGATCTCCAATGGCCTTCACCATGAG31937942CTTCAATATACTTGGTGAGCAATGTGTCCTCTCTGGGAGTCCAAACACCT
Prunus dulcis genome assembly, chromosome: 2.
OZ022198.1:23079029-23079048
GCATGGATCTCCAATGGCCTTCCCCATGAG23079029CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus dulcis genome assembly, chromosome: 2.
OZ022207.1:23123097-23123116
GCATGGATCTCCAATGGCCTTCCCCATGAG23123097CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus armeniaca genome assembly, chromosome: 2.
OZ046361.2:23150411-23150430
GCATGGATCTCCAATGGCCTTCCCCATGAG23150411CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus padus genome assembly, chromosome: 7.
OZ060517.1:18736111-18736130
GCATGGATCTCCAATGGCCTTCGCCATGAG18736111CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus armeniaca genome assembly, chromosome: 2.
OZ177838.1:25904143-25904162
GCATGGATCTCCAATGGCCTTCCCCATGAG25904143CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
Prunus avium genome assembly, chromosome: 2.
OZ278088.1:36043548-36043567
GCATGGATCTCCAATGGCCTTCCCCATGAG36043548CTTCAATATACTTGGTGAGCAATGTGTCTTCTCTAGGAGTCCATGGACCT
EST 9081 Green Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone bga011k06q 5', mRNA sequence.
CV047374.1:220-239
AGGTCCATGGACTCCTAGAGAAGACACATT220GCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGC
SD1MrF3 YG/PR Prunus cerasus cDNA, mRNA sequence.
EE487874.1:199-218
AGGTCCATGGACTCCTAGAGAAGACACATT199GCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGC
Pm_1587 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW870161.1:304-323
AGGTCCATGGACTCCTAGAGAAGACACATT304GCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGC
Prunus mume strain hongmei clone P17 SSR marker genomic sequence.
GU458018.1:191-210
AGGTCCATGGACTCCTAGAGAAGACACATT191GCTCACCAAGTATATTGAAG
Prunus mume strain oushuku clone P18 SSR marker genomic sequence.
GU458019.1:193-212
AGGTCCATGGACTCCTAGAGAAGACACATT193GCTCACCAAGTATATTGAAG
Prunus avium R2R3-MYB transcription factor (MYBPA1) mRNA, complete cds.
GU938690.1:72-91
AGGTCCATGGACTCCTAGAGAAGACACATT72GCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGC
Rosa rugosa MYB5 mRNA, complete cds.
MH939144.1:122-141
AGGTCCATGGACTCCCAGAGAGGACACATT122GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Prunus padus genome assembly, chromosome: 8.
OZ060518.1:7710707-7710726
AGGTCCATGGACTCCTAGAGAAGACACATT7710707GCTCACCAAGTATATTGAAGCTCATGGGGAAGGCCATTGGAGATCCATGC
Rosa agrestis genome assembly, chromosome: 5.
OZ215660.1:13820821-13820840
AGGTCCATGGACTCCCAGAGAGGACACATT13820821GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa agrestis genome assembly, chromosome: 5.
OZ215692.1:13971236-13971255
AGGTCCATGGACTCCCAGAGAGGACACATT13971236GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa agrestis genome assembly, chromosome: 23.
OZ215693.1:14196641-14196660
AGGTCCATGGACTCCCAGAGAGGACACATT14196641GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa spinosissima genome assembly, chromosome: 8.
OZ218473.1:14380903-14380922
AGGTCCATGGACTCCCAGAGAGGACACATT14380903GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa canina genome assembly, chromosome: 22.
OZ221622.1:15281229-15281248
AGGTCCATGGACTCCCAGAGAGGACACATT15281229GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa canina genome assembly, chromosome: 23.
OZ221623.1:13943155-13943174
AGGTCCATGGACTCCCAGAGAGGACACATT13943155GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Rosa chinensis MYB5 transcription factor mRNA, complete cds.
PP130369.1:72-91
AGGTCCATGGACTCCCAGAGAGGACACATT72GCTCACCAAGTATATTGAAGCTCATGGTGAAGGCCATTGGAGATCCTTGC
Dioctria linearis genome assembly, chromosome: 1.
OZ005740.1:243051002-243051021
GATGCATATTAAACTAACCATACAGCGTGA243051002GCTCACCAAGTATATTGAAGCTATACCATAGGGAAATAAGGAACCAATTA
Triturus cristatus genome assembly, chromosome: 5_2.
OZ123760.1:659804495-659804514
AGAATCCACAAAATGGTGGGAGCATAAATC659804495GCTCACCAAGTATATTGAAGTTGGTTGTATTCCGAGGGGTTTGCATATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCAATATACTTGGTGAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCAATATACTTGGTGAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.516 | 0.508 | search_plus_done; http://172.18.8.135:50900/match?q=CTTCAATATACTTGGTGAGC&k=0&no_gap=0&offset=0&limit=50
1.316 | 0.800 | search_minus_done; http://172.18.8.135:50900/match?q=GCTCACCAAGTATATTGAAG&k=0&no_gap=0&offset=0&limit=37
1.328 | 0.012 | cgi_end;

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