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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:32:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Camellia sinensis mRNA, clone: RT30A04S, expressed in root, unspecified EST.
AB505868.1:15-35
CACTCACTCATTCA15CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
TL001G12 Young leaf cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA clone TL001G12 5', mRNA sequence.
CV013588.1:18-38
GGGGACTCACTCATTCA18CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTGTGTG
Camellia sinensis mRNA, clone: YL05A11, 5' end sequence, expressed in young leaves.
FS958867.1:5-25
TTCA5CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
EST0529 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_01_21.M13+_E03.ab1, mRNA sequence.
GE650202.1:35-55
GGCCATTACGGCCGGGGACTCACTCATTCA35CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
EST0996 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07092008-CHAG_07_65.M13+_A09.ab1, mRNA sequence.
GE650669.1:35-55
GGCCATTACGGCCGGGGACTCACTCATTCA35CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
EST1113 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_09_25.M13+_A04.ab1, mRNA sequence.
GE650786.1:35-55
GGCCATTACGGCCGGGGACTCACTCATTCA35CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGGCATTTGTTGTTG
EST1128 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_09_41.M13+_A06.ab1, mRNA sequence.
GE650801.1:35-55
GGCCATTACGGCCGGGGACTCACTCATTCA35CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
EST3409 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone OUYI_CG_62.M13+_F08, mRNA sequence.
GE653082.1:27-47
TATCGGCCATTACGGCCGGGGATTCA27CTTCAATCACTAACCATTCTAGAGAGAGAGAGATGGAAGGGAAAGAAGAAG
Tea250_2006-04-14_1/Tea250_E12_1 Camellia sinensis (tea) cultivar TRI2043 EST library Camellia sinensis cDNA, mRNA sequence.
JK478028.1:14-34
GGGGACTCATTCA14CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
Camellia oleifera clone 6186-1 aquaporin mRNA, complete cds.
EU850810.1:15-35
GACTCACTCTTTCA15CTTCAATCACTAACCATTCTAGAGAGAGAAAAAGTGTGACATTTGTTGTTC
Camellia oleifera clone 6186-2 aquaporin mRNA, complete cds.
EU850811.1:7-27
GACTCA7CTTCAATCACTAACCATTCTAGAGAGAGAAAAAGTGTGACATTTGTTGTTC
Camellia sinensis aquaporin protein 3 mRNA, complete cds.
KC008718.1:18-38
ACATGGGGACTCATTCA18CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
Camellia sinensis aquaporin protein AQU17 mRNA, complete cds.
KC215410.1:18-38
ACATGGGGACTCATTCA18CTTCAATCACTAACCATTCTAGAGGGAGAAAAAGTGTGACATTTGTTGTTG
3_Tms_b3v08.
OB796881.1:399-419
AAAATAACATCACAGAACTACAACTGTGAT399TAGAATGGTTAGTGATTGAAGAAACAAACTGATGAGAAACTGATTGTTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTCAATCACTAACCATTCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCAATCACTAACCATTCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.912 | 0.903 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCAATCACTAACCATTCTA&k=0&no_gap=0&offset=0&limit=50
1.024 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=TAGAATGGTTAGTGATTGAAG&k=0&no_gap=0&offset=0&limit=37
1.025 | 0.001 | cgi_end;

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