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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:34:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 18350 from patent US 7557201.
GP487353.1:303-322
TAAGGTTGAGAGGCGGAATTATTGAGCCTT303CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11472 from patent US 10766935.
MV654867.1:271-290
TGAGGCTTAGAGGAGGAATCATTGAGCCTT271CTTTAATGGCTTTGGCTCGTAAGTACAACCAAGACAAGATGATTTGCCGC
Sequence 11517 from patent US 10766935.
MV654912.1:285-304
TGAGGCTTAGAGGAGGTATCATTGAGCCAT285CTTTAATGGCTTTGGCTCGTAAATACAATCAAGATAAGATGATCTGCCGC
Sequence 11530 from patent US 10766935.
MV654925.1:304-323
TAAGGTTGAGAGGTGGAATTATTGAGCCTT304CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11567 from patent US 10766935.
MV654962.1:309-328
TAAGGTTGAGAGGTGGAATTATTGAGCCTT309CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11719 from patent US 10766935.
MV655114.1:299-318
TAAGGTTGAGAGGCGGAATTATTGAGCCTT299CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11472 from patent US 11566053.
OS278346.1:271-290
TGAGGCTTAGAGGAGGAATCATTGAGCCTT271CTTTAATGGCTTTGGCTCGTAAGTACAACCAAGACAAGATGATTTGCCGC
Sequence 11517 from patent US 11566053.
OS278391.1:285-304
TGAGGCTTAGAGGAGGTATCATTGAGCCAT285CTTTAATGGCTTTGGCTCGTAAATACAATCAAGATAAGATGATCTGCCGC
Sequence 11530 from patent US 11566053.
OS278404.1:304-323
TAAGGTTGAGAGGTGGAATTATTGAGCCTT304CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11567 from patent US 11566053.
OS278441.1:309-328
TAAGGTTGAGAGGTGGAATTATTGAGCCTT309CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Sequence 11719 from patent US 11566053.
OS278593.1:299-318
TAAGGTTGAGAGGCGGAATTATTGAGCCTT299CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
GA__Eb0032N14f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0032N14f, mRNA sequence.
BF278494.1:140-159
TAAGGATGAGAGGCGGAATTATTGAGCCTT140CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
GA__Ed0061C11f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0061C11f, mRNA sequence.
BQ403704.1:140-159
TAAGGTTGAGAGGCGGAATTATTGAGCCTT140CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
GR__Ea17M02.r GR__Ea Gossypium raimondii cDNA clone GR__Ea17M02 3', mRNA sequence.
CO095224.1:300-319
TAAGGTTGAGAGGTGGAATTATTGAGCCTT300CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
UFL_612_20 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES794608.1:253-272
TAAGGTTGAGAGGTGGAATTATTGAGCCTT253CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
UFL_641_06 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES806396.1:296-315
TAAGGTTGAGAGGTGGAATTATTGAGCCTT296CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
UFL_192_88 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES813122.1:255-274
TAAGGTTGAGAGGTGGAATTATTGAGCCTT255CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
UFL_298_82 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES814233.1:213-232
TAAGGTTGAGAGGCGGAATTATTGAGCCTT213CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
UFL_351_37 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES821013.1:236-255
TAAGGTTGAGAGGCGGAATTATTGAGCCTT236CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
h11_03ju_2g.s 03ju Brassica juncea cDNA clone h11_03ju_2g 5, mRNA sequence.
GT072598.1:253-272
TGAGGCTTAGAGGAGGAATCATTGAGCCTT253CTTTAATGGCTTTGGCTCGTAAGTACAACCAAGACAAGATGATTTGCCGC
1P16-17-G3-T3 Subtracted cDNA library from Gossypium hirsutum L. variety Bikaneri Narma Gossypium hirsutum cDNA, mRNA sequence.
JG454234.1:38-57
TAAGGTTGAGAGGTGGAATTATTGAGCCTT38CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
B12-109B12 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK792950.1:315-334
TAAGGTTGAGAGGTGGAATTATTGAGCCTT315CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
D01-060D1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK794168.1:315-334
TAAGGTTGAGAGGTGGAATTATTGAGCCTT315CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
B09-35B09 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK796204.1:313-332
TAAGGTTGAGAGGCGGAATTATTGAGCCTT313CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
G11-088G11 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK796230.1:313-332
TAAGGTTGAGAGGCGGAATTATTGAGCCTT313CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
B02-GC7602 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK805915.1:265-284
TAAGGTTGAGAGGTGGAATTATTGAGCCTT265CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
A06-GC4646 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK805961.1:265-284
TAAGGTTGAGAGGTGGAATTATTGAGCCTT265CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:61557999-61558018
TCAGGTTGAGAGGTGGAATTATTGAGCCTT61557999CTTTAATGGCTTTGGCTCGTAAATTCAACCAAGACAAAATGATTTGCCGC
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:61579044-61579063
TAAGGTTGAGAGGCGGAATTATTGAGCCTT61579044CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypioides kirkii chromosome KI_11.
CP032253.1:54824254-54824273
TAAGGTTGAGAGGTGGAATTATTGAGCCTT54824254CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium turneri isolate D10-2 chromosome D10_11.
CP032581.1:66802708-66802727
TAAGGTTGAGAGGTGGAATTATTGAGCCTT66802708CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:104268879-104268898
TGAGGTTGAGAGGTGGAATCATTGAGCCTT104268879CTTTAATGGCTTTGGCTCGTAAATCCAACCAAGACAAAATGATAGTGTTG
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:125950956-125950975
TAAGGTTGAGAGGTGGAATTATTGAGCCTT125950956CTTTAATGGCTTTGGCTCGTAAATTCAACCAAGACAAAATGATTTGCCGC
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:125971916-125971935
TAAGGTTGAGAGGCGGAATTATTGAGCCTT125971916CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:135669508-135669527
TAAGGTTGAGAGGTGGAATTATTGAGCCTT135669508CTTTAATGGCTTTGGCTCGTAAACACAACCAAGACAAAATGATTTGTCGC
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:135703523-135703542
TAAGGTTGAGAGGTGGATTTATTGAGCCTT135703523CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium bickii isolate GPG1lz chromosome 11.
CP106711.1:135715748-135715767
TAAGGCTGAGAGGTGGAATTATTGAGCCTT135715748CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Gossypium rotundifolium isolate GPK201 chromosome 1.
CP106722.1:161629698-161629717
TAAGGTTGAGAGGTGGAATCATTGAGCCTT161629698CTTTAATGGCTTTGGCTCGTAAATCCAACTAAGACAAAATGATAGTTTTG
Hibiscus tridactylites genome assembly, chromosome: 3.
OY288267.1:23453194-23453213
TGAGGTTGAGAGGTGGAATTATTGAGCCTT23453194CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Hibiscus tridactylites genome assembly, chromosome: 7.
OY288271.1:22515647-22515666
TGAGGTTGAGAGGTGGAATTATTGAGCCTT22515647CTTTAATGGCTTTGGCTCGTAAATACAACCAAGACAAAATGATTTGCCGC
Cardamine chenopodiifolia genome assembly, chromosome: 21.
OZ000479.1:13311398-13311417
TGAGGCTCAGAGGAGGTATCATTGAGCCTT13311398CTTTAATGGCTTTGGCTCGTAAGTACAACCAAGACAAGATGATTTGCCGC
Erithacus rubecula genome assembly, chromosome: 10.
LR812113.1:23807025-23807044
CTTGTTTTGTGGGATACTTGCTGCTGTGAC23807025ACGAGCCAAAGCCATTAAAGGCTAGAAAGAGAGGAGGAAGTAAAAGCTTT
Cinclus cinclus genome assembly, chromosome: 8.
OY759685.1:5288453-5288472
CTTGTTTTGTGGGATACTTGCTGCTGTAAC5288453ACGAGCCAAAGCCATTAAAGGCTAGAAAGAGAGGAAGAAATAAAAGCTTT
rayctn0_0071_E09.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO094638.1:324-343
GCGGCAAATCATTTTGTCTTGGTTGTATTT324ACGAGCCAAAGCCATTAAAGAAGGCTCAATAATTCCACCTCTCAACCTTA
Gossypium raimondii isolate D5-4 chromosome D5_11.
CP032563.1:966704-966723
GCGGCAAATCATTTTGTCTTGGTTGTATTT966704ACGAGCCAAAGCCATTAAAGAAGGCTCAATAATTCCACCTCTCAACCTTA
Gossypium herbaceum isolate Zhongcao1 chromosome 11.
CP106686.1:1223856-1223875
GCGGCAAATCATTTTGTCTTGGTTGTATTT1223856ACGAGCCAAAGCCATTAAAGAAGGCTCAATAATTCCGCCTCTCAACCTTA
Gossypium herbaceum isolate Zhongcao1 chromosome 11.
CP106686.1:1244821-1244840
GCGGCAAATCATTTTGTCTTGGTTGAATTT1244821ACGAGCCAAAGCCATTAAAGAAGGCTCAATAATTCCACCTCTCAACCTTA
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:21390425-21390444
CAACACTATCATTTTGTCTTGGTTGGATTT21390425ACGAGCCAAAGCCATTAAAGAAGGCTCAATGATTCCACCTCTCAACCTCA
Camelina sativa cultivar CO46 chromosome 8.
CP131557.1:27385675-27385694
AAAAAAAAAAGCTAACTTGCGACATATCTT27385675ACGAGCCAAAGCCATTAAAGAAGGCTCAATGATACCTTCTCTAAGCCTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTAATGGCTTTGGCTCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTAATGGCTTTGGCTCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.116 | 2.107 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTAATGGCTTTGGCTCGT&k=0&no_gap=0&offset=0&limit=50
2.417 | 0.301 | search_minus_done; http://172.18.8.135:50400/match?q=ACGAGCCAAAGCCATTAAAG&k=0&no_gap=0&offset=0&limit=9
2.423 | 0.006 | cgi_end;

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