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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 15:26:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:18752441-18752460
ACTATGAACTTTAGACTTCTCTTTGTACCT18752441CTTTCCGAGTTTCCATAGTGCATCACATATATATATAGCAATCATCTTAA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:13202225-13202244
ACTATGAACTTTAGACTTCTCTTTGTACCT13202225CTTTCCGAGTTTCCATAGTGCATCACATATATATATAGCAATCATCTTAA
Brassica rapa genome, scaffold: A04.
LR031576.1:12199789-12199808
TACATGAACTTTAGACTTCTCTTTGTACCT12199789CTTTCCGAGTTTCCATAGTGCATCACATATATAGCAATCATCTTAAATTG
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:12449907-12449926
TACATGAACTTTAGACTTCTCTTTGTACCT12449907CTTTCCGAGTTTCCATAGTGCATCACATATATAGCAATCATCTTAAATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTCCGAGTTTCCATAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTCCGAGTTTCCATAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.371 | 0.362 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTCCGAGTTTCCATAGTG&k=0&no_gap=0&offset=0&limit=50
0.472 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=CACTATGGAAACTCGGAAAG&k=0&no_gap=0&offset=0&limit=46
0.472 | 0.000 | cgi_end;

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