GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 12:09:42, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:29042162-29042181
CTCTATCTCGTCCGATACTCTCTTCTTTCT29042162CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCATCTTTCTCTCTCTCAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:11936330-11936349
CTTTATCTCGTCTGATCCTCTTTTTTTTCT11936330CTTTCCTTCAATCATCTCGTATTTTCTTCCTTCCTCTCTCATTTTTTTCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:29393279-29393298
CTCTATCTCGTCCGATACTCTCTTCTTTCT29393279CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCATCTTTCTCTCTCTCAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:12705502-12705521
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12705502CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTCTCT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:30409186-30409205
CTCTATCTCGTCCGATACTCTCTTCTTTCT30409186CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCATCTTTCTCTCTCTCAT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:11831669-11831688
CTCTATCTCGTCTGATCCTCTCTTCTTTAT11831669CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTTTTT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:29462578-29462597
CTCTATCTCGTCCGATCCTCTCTTCTTTCT29462578CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:28271792-28271811
CTCTATCTCGTCCGATCCTCTCTTCTTTCT28271792CTTTCCTTCAATCATCTCGTATTTTCTTCCCTTCTCTTTCTCTCTCTCTC
Malus ioensis cultivar PI590015 chromosome 11.
CP154734.1:11814184-11814203
CTCTATCTCGTCCGATCCTCTCTTCTTTCT11814184CTTTCCTTCAATCATCTCGTATTTTCTTCCCTTCTCTCTCCTATTTCTCT
Malus ioensis cultivar PI590015 chromosome 11.
CP154751.1:11686491-11686510
CTCTATCTCGTCCGATCCTCTCTTCTTTCT11686491CTTTCCTTCAATCATCTCGTATTTTCTTCCCTTCTCTCTCCTATTTCTCT
Malus coronaria cultivar PI590014 chromosome 11.
CP154768.1:10599879-10599898
CTCTATCTCGTCCGATCCTCTCTTCTTTCT10599879CTTTCCTTCAATCATCTCGTATTTTCTTCCCTTCTCTCTCCTATTTCTCT
Malus coronaria cultivar PI590014 chromosome 11.
CP154785.1:11531856-11531875
CTCTATCTCGTCCGATCCTCTCTTCTTTCT11531856CTTTCCTTCAATCATCTCGTATTTTCTTCCCTTCTCTCTCCTATTTCTCT
Chaenomeles sinensis isolate sampleA chromosome 10.
CP162373.1:17777339-17777358
CTATTTCGTCTGATCCTCTCTCTTCTTTCT17777339CTTTCCTTCAATCATCTCGTACTTTATTTCCTCTTCCTCTCTTGTGGCCC
Malus domestica cultivar WA 38 chromosome 11B.
CP165694.1:30070704-30070723
CTCTATCTCGTCCGATCCTCTCTTCTTTCT30070704CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus domestica cultivar WA 38 chromosome 11A.
CP165711.1:12071054-12071073
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12071054CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTCTCT
Malus domestica cultivar WA 38 chromosome 11A.
CP165711.1:29519095-29519114
CTCTATCTCGTCCGATCCTCTCTTCTTTCT29519095CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus domestica cultivar Golden Delicious chromosome 11.
CP168775.1:12397186-12397205
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12397186CTTTCCTTCAATCATCTCGTATTTTCTTCCCCCCTCTCTCATTTTTCTCT
Malus domestica cultivar Golden Delicious chromosome 11.
CP168792.1:12250807-12250826
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12250807CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTTTTT
Malus domestica cultivar Golden Delicious chromosome 11.
CP168792.1:29367826-29367845
CTCTATCTCGTCCGATCCTCTCTTCTTTCT29367826CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:12073424-12073443
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12073424CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTTTTT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:29195425-29195444
CTCTATCTCGTCCGATCCTCTCTTCTTTCT29195425CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:12703130-12703149
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12703130CTTTCCTTCAATCATCTCGTATTTTCTTCCCCCCTCTCTCATTTTTCTCT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:29469143-29469162
CTCTATCTCGTCCGATCCTCTCTTCTTTCT29469143CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:12690354-12690373
CTCTATCTCGTCTGATCCTCTCTTCTTTAT12690354CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTCTCATTTTTCTCT
Malus domestica genome assembly, chromosome: 11.
OU745001.1:30068547-30068566
CTCTATCTCGTCCGATCCTCTCTTCTTTCT30068547CTTTCCTTCAATCATCTCGTATTTTCTTCCCTCCTCTTTCTCTCTCTCAT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:4190242-4190261
CTCTATCTTGTCCGATCCTTTCTTCTTTCT4190242CTTTCCTTCAATCATCTCGTATTTTCTTCACTCCTCTATCCTCTTTCTCT
Anthyllis vulneraria genome assembly, chromosome: 3.
OZ277726.1:15051906-15051925
GCAATTTTGACATTCCTTTCTTATCTGAAC15051906CTTTCCTTCAATCATCTCGTGGGGAAGATCCCAACAGGTACGCAACTCCA
Karpatiosorbus bristoliensis genome assembly, chromosome: 2C.
OZ287406.1:30301428-30301447
CTATCTCATCCGATCCTCTCTCTTATTTCG30301428CTTTCCTTCAATCATCTCGTACTTTCTTTCCACCTCTATCATTTTTCTCC
Metabacillus endolithicus strain KCTC 33579 chromosome.
CP095550.1:1928911-1928930
AAAATCATGATTTCCTAAAACATGATATTT1928911CTTTCCTTCAATCATCTCGTAGACTGGTAGAATTTGATCAAAACTCGACA
Cryptosula pallasiana genome assembly, chromosome: 1.
OX183130.1:32637587-32637606
TTCTCTTTCACTGATCTCTCCGTCAATCAT32637587CTTTCCTTCAATCATCTCGTTTTCACTCATCACTCCTCCACTCATCTCTC
Melinaea menophilus genome assembly, chromosome: 15.
OZ220166.1:3395768-3395787
TTACCCAGTCCGTTCATCTATTATTTGTAA3395768CTTTCCTTCAATCATCTCGTGTTAATTAATTCACAAATATCCAATGTCCA
Melinaea menophilus genome assembly, chromosome: 15.
OZ220184.1:4334291-4334310
TTACCCAGTCCGTTCATCTATTATTTGTAA4334291CTTTCCTTCAATCATCTCGTGTTAATTAATTCACAAATATCCAATGTCCA
Oesophagostomum venulosum genome assembly, chromosome: I.
OZ308404.1:24135291-24135310
TGCTTACAAGGAAATCAATTCAGAAAATAA24135291CTTTCCTTCAATCATCTCGTATTGAATTCATAGTTGCTGAAACAGAGCTG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:3254729-3254748
GGAGAGAGAGGAGAGAGGAGGAAAGAAAGT3254729ACGAGATGATTGAAGGAAAGAGAAAAAAGAAAGAGGATCGGACGAGATAG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:3279964-3279983
GGAGAGAGAGGAGAGAGGAGGAAAGAAAGT3279964ACGAGATGATTGAAGGAAAGAGAAAAAAGAAAGAGGATCGGACGAGATAG
Malus domestica cultivar Red Fuji chromosome 11.
CP147803.1:12080950-12080969
ATGAGAGAGAGAAAGAGGAGGGAAGAAAAT12080950ACGAGATGATTGAAGGAAAGAGAAAGAAGAGAGGATCGGACGAGATAGAG
Malus domestica cultivar Red Fuji chromosome 11.
CP147803.1:29705327-29705346
AAAAAAAAATGAGAGAGGAGGGAAGAAAAT29705327ACGAGATGATTGAAGGAAAGATAAAGAAGAGAGGATCAGACGAGATAGAG
Malus domestica cultivar Red Fuji chromosome 11.
CP147812.1:29615191-29615210
AGAGAAAAATGAGAGAGGAGGGAAGAAAAT29615191ACGAGATGATTGAAGGAAAGATAAAGAAGAGAGGATCAGACGAGATAGAG
Malus ioensis cultivar PI590015 chromosome 10.
CP154733.1:35404720-35404739
AGAGAGAGAGGAGAGAGGAGGGAAGAAAAT35404720ACGAGATGATTGAAGGAAAGATAAAGAAGAGAGGATCAGACGAGATAGAA
Malus ioensis cultivar PI590015 chromosome 10.
CP154750.1:39255726-39255745
AGAGAAAGAGAAGAGAGAAGGGAAGAAAAT39255726ACGAGATGATTGAAGGAAAGAGAAAGAAGAGAGGATCGGACGAGATAGAA
Malus coronaria cultivar PI590014 chromosome 10.
CP154767.1:39959630-39959649
AGAGAAAGAGAAGAGAGAAGGGAAGAAAAT39959630ACGAGATGATTGAAGGAAAGAGAAAGAAGAGAGGATCGGACGAGATAGAA
Malus coronaria cultivar PI590014 chromosome 10.
CP154784.1:39975380-39975399
AGAGAAAGAGAAGAGAGAAGGGAAGAAAAT39975380ACGAGATGATTGAAGGAAAGAGAAAGAAGAGAGGATCGGACGAGATAGAA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:3112432-3112451
GGAGAGAGAGGAGAGAGGAGGAAAGAAAGT3112432ACGAGATGATTGAAGGAAAGAGAAAAAAGAAAGAGGATCGGACGAGATAG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:12257796-12257815
ATGAGAGAGAGAAAGAGGAGGGAAGAAAAT12257796ACGAGATGATTGAAGGAAAGAGAAAGAAGAGAGGATCGGACGAGATAGAG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:29300472-29300491
AGAGAAAAATGAGAGAGGAGGGAAGAAAAT29300472ACGAGATGATTGAAGGAAAGATAAAGAAGAGAGGATCAGACGAGATAGAG
Boloria freija genome assembly, chromosome: 9.
OZ187018.1:1935001-1935020
TTCAAAATATAACAATTTGCTACATATTCT1935001ACGAGATGATTGAAGGAAAGGTAGCTCGGTTTCATAAATATTACCAAGCC
Ischnochiton rissoi genome assembly, chromosome: 4.
OZ252584.1:8435366-8435385
AAACACCTGGATTTCTCCTCGATTTTTTCA8435366ACGAGATGATTGAAGGAAAGTTAACACGATAAACAAGTGCTCGGTGGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CTTTCCTTCAATCATCTCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTCCTTCAATCATCTCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.318 | 0.309 | search_plus_done; http://172.18.8.135:50900/match?q=CTTTCCTTCAATCATCTCGT&k=0&no_gap=0&offset=0&limit=50
0.679 | 0.360 | search_minus_done; http://172.18.8.135:50900/match?q=ACGAGATGATTGAAGGAAAG&k=0&no_gap=0&offset=0&limit=17
0.689 | 0.010 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).