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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 00:14:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES05M13, 5' end sequence.
FY384282.1:16-35
GCACAAGCGAGAGTA16GAAAACACAACAACGGGCTTTTTTTTTTCCACTAAAAAAAACTCCCCTCT
Dianthus caryophyllus mRNA, clone: CFES03B09, 5' end sequence.
FY394959.1:11-30
GGCGAGAGTA11GAAAACACAACAACGGGCTTTTTTTTTCCGCTAAAAAAACTCCCCTCTGC
Dianthus caryophyllus mRNA, clone: CFES03G18, 5' end sequence.
FY395087.1:10-29
GCGAGAGTA10GAAAACACAACAACGGGCTTTTTTTTTTCCGCTAAAAAAACTCCCCTCTG
Dianthus caryophyllus mRNA, clone: CFES11I09, 5' end sequence.
FY398147.1:3-22
GA3GAAAACACAACAACGGGCTTTTTTTTTTTCCACTAAAAAAAACTCCCCTC
Dianthus caryophyllus mRNA, clone: CFES11I11, 5' end sequence.
FY398149.1:3-22
GA3GAAAACACAACAACGGGCTTTTTTTTTTTCCACTAAAAAAAACTCCCCTC
Dianthus caryophyllus mRNA, clone: CFES23P17, 5' end sequence.
FY402808.1:16-35
GCACAAGCGAGAGTA16GAAAACACAACAACGGGCTTTTTTTTTTCCGCTAAAAAAACTCCCCTCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAAACACAACAACGGGCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAAACACAACAACGGGCTT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.925 | 0.916 | search_plus_done; http://172.18.8.135:50400/match?q=GAAAACACAACAACGGGCTT&k=0&no_gap=0&offset=0&limit=50
1.031 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=AAGCCCGTTGTTGTGTTTTC&k=0&no_gap=0&offset=0&limit=44
1.031 | 0.000 | cgi_end;

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