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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:59:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Micromys minutus genome assembly, chromosome: 30.
OZ004810.1:6668596-6668615
CCATGTTACTCCTGTCTTTTTCATCAAGAG6668596GAACATCTTCCATCCGCTTGCTAAGAAAACTTGTAATAAACACACCGCAC
VCDC4993 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_007_N23 5', mRNA sequence.
JG757311.1:398-417
TGTTTTGACCAGCATGGAGATATTGCCTGC398CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
VCDC5095 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_008_C08 5', mRNA sequence.
JG757413.1:398-417
TGTTTTGACCAGCATGGAGATATTGCCTGC398CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCTCTT
VCDC5206 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_008_H01 5', mRNA sequence.
JG757524.1:398-417
TGTTTTGACCAGCATGGAGATATTGCCTGC398CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
VCDC17495 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_010_L05 5', mRNA sequence.
JG770533.1:183-202
AATAAATGTATTTTGTCAGATATTGCCTGC183CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
VCDC17521 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_010_M21 5', mRNA sequence.
JG770559.1:183-202
AATAAATGTATTTTGTCAGATATTGCCTGC183CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
VCDC17838 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_011_N21 5', mRNA sequence.
JG770876.1:183-202
AATAAATGTATTTTGTCAGATATTGCCTGC183CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:31139908-31139927
AATAAATGTATTTTGTCAGATATTGCCTGC31139908CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:29120224-29120243
AATAAATGTATTTTGTCAGATATTGCCTGC29120224CAAGCGGATGGAAGATGTTCTGGAGCATGCTTTTGAAGGTGGATGCCCTT
Burkholderia sp. PAMC 26561 chromosome 2, complete sequence.
CP014307.1:476891-476910
CCGACCCAACACCCGAACCCATTGCAAGCG476891CAAGCGGATGGAAGATGTTCAGGCTTGCGACAAAGCCCGCAAAGATCGCG
Burkholderia sp. PAMC 28687 chromosome 3, complete sequence.
CP014507.1:999846-999865
CCGACCCAACACCCGAACCCATTGCAAGCG999846CAAGCGGATGGAAGATGTTCAGGCTTGCGACAAAGCCCGCAAAGATCGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAACATCTTCCATCCGCTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACATCTTCCATCCGCTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.222 | 0.213 | search_plus_done; http://172.18.8.135:50400/match?q=GAACATCTTCCATCCGCTTG&k=0&no_gap=0&offset=0&limit=50
0.818 | 0.596 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGCGGATGGAAGATGTTC&k=0&no_gap=0&offset=0&limit=49
0.825 | 0.007 | cgi_end;

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