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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 19:04:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RR3AB29TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV548554.1:406-427
TGGATCCCAGAGACCGTGGAGATCTACGAG406GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RR1C925TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EX748206.1:415-436
TGGATCCCAGAGACCGTGGAGATCTACGAG415GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RR3BV01TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX762698.1:412-433
TGGATCCCAGAGACCGTGGAGATCTACGAG412GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAA
RR3CX61TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX765970.1:412-433
TGGATCCCAGAGACCGTGGAGATCTACGAG412GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RR1DQ42TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY899043.1:412-433
TGGATCCCAGAGACCGTGGAGATCTACGAG412GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RR1F981TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD534667.1:415-436
TGGATCCCAGAGACCGTGGAGATCTACGAG415GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RR2FK83TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD543403.1:412-433
TGGATCCCAGAGACCGTGGAGATCTACGAG412GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAGAAACGTCCCTGAGAACA
RR3FN54TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD551669.1:411-432
TGGATCCCAGAGACCGTGGAGATCTACGAG411GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
RS2H179TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD948701.1:415-436
TGGATCCCAGAGACCGTGGAGATCTACGAG415GAAGGTTCCAAGTCCGTGAAATTCGATTTCAACAAAAACGTCCCTGAGAACA
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 6.
CP094636.1:31493392-31493413
TGGATCCCGGAAACCATCGAGATATACAAG31493392GAAGGTTCCAAGTCCGTGAAATTCGATTTCAATAAAAACGTCCCTGAGAACA
Barbarea vulgaris genome assembly, chromosome: 8.
OY763894.1:2347755-2347776
TGGATCCCGGAAACCATCGAGATCTACAAA2347755GAAGGTTCCAAGTCCGTGAAATTCGATTTCAGCAAACACGTTCCTGAGAACA
RR3AB29JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV544205.1:435-456
TGTTCTCAGGGACGTTTTTGTTGAAATCGA435ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR3BV01JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX766907.1:494-515
TGTTCTCAGGGACGTTTTTGTTGAAATCGA494ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR3CX61JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX769676.1:489-510
TGTTCTCAGGGACGTTTTTGTTGAAATCGA489ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR1DQ42JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EY894916.1:485-506
TGTTCTCAGGGACGTTTTTGTTGAAATCGA485ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR1F981JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
FD530536.1:392-413
TGTTCTCAGGGACGTTTTTGTTGAAATCGA392ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR2FK83JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD539242.1:476-497
TGTTCTCAGGGACGTTTCTGTTGAAATCGA476ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
RR4ER92JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
FD553225.1:483-504
TGTTCTCAGGGACGTTTTTGTTGAAATCGA483ATTTCACGGACTTGGAACCTTCCTCGTAGATCTCCACGGTCTCTGGGATCCA
Camelina sativa cultivar CO46 chromosome 2.
CP131550.1:29008670-29008691
TGTTCTCAGGGACGTTTTTATTGAAATCGA29008670ATTTCACGGACTTGGAACCTTCCTTGTATATCTCGATGGTTTCAGGGATCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAAGGTTCCAAGTCCGTGAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGGTTCCAAGTCCGTGAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.730 | 0.722 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGGTTCCAAGTCCGTGAAAT&k=0&no_gap=0&offset=0&limit=50
1.384 | 0.653 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTCACGGACTTGGAACCTTC&k=0&no_gap=0&offset=0&limit=39
1.389 | 0.005 | cgi_end;

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