GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:48:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB022L12, complete sequence.
AC189266.2:15732-15751
GAATCAAATAATCAAAAAAAAAAGTAAAAA15732GAATCGTGGATAGCTTCTGGAGACTTCTTTTGGTGTTCTCTGTTCAAGTG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:5610157-5610176
AGAATCAAATAATCAAAAAAAAAAAAAAAA5610157GAATCGTGGATAGCTTCTGGAGACTTCTTCTGGTGTTCTCTGTTTCAAGT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:5085455-5085474
AGAATCAAATAATCAAAAAAAAAAAAAAAA5085455GAATCGTGGATAGCTTCTGGAGACTTCTTCTGGTGTTCTCTGTTTCAAGT
Brassica rapa genome, scaffold: A09.
LR031568.1:5208055-5208074
GAATCAAATAATCAAAAAAAAAAAAAAAAA5208055GAATCGTGGATAGCTTCTGGAGACTTCTTCTGGTGTTCTCTGTTTCAAGT
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:5410378-5410397
AAGAATCAAATAATCAAAAAAAAAAAAAAA5410378GAATCGTGGATAGCTTCTGGAGACTTCTTCTGGTGTTCTCTGTTTCAAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAATCGTGGATAGCTTCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATCGTGGATAGCTTCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.188 | 0.180 | search_plus_done; http://172.18.8.135:50400/match?q=GAATCGTGGATAGCTTCTGG&k=0&no_gap=0&offset=0&limit=50
0.289 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGAAGCTATCCACGATTC&k=0&no_gap=0&offset=0&limit=45
0.289 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).