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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:00:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus vulgaris genome assembly, chromosome: 2.
LR738612.1:23195164-23195183
AACTAGACCATAAGCTCTGCTACTTGCTAG23195164GACACAACCTTGGACAGCAAGTGTGCAAGTCTCTGGGCCTCAGCTTCTCC
Metarhizium brunneum strain 4556 chromosome 1, complete sequence.
CP058932.1:1084142-1084161
CGCGACTCTCCATCTCCAACTACACAAACC1084142GACACAACCTTGGACAGCAACTCTTGTGATCAAAAAAATCTAGACACAAT
Daucus carota subsp. sativus cultivar DH1 chromosome 8.
CP093350.1:22755253-22755272
CTCATGGCCTACGACCCAAGCCCCAGTCAA22755253GACACAACCTTGGACAGCAATGTAAGCCGCCCATCCCAAGTAATTAAGAG
Daucus carota subsp. sativus cultivar DH1 chromosome 8.
CP093350.1:22759324-22759343
CTCGTGGCCTACGACCCAAGCCCCGGTTAA22759324GACACAACCTTGGACAGCAATGTAAGCTGCCCAACCTAAGTAATTAAGAG
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:34666540-34666559
CTCATGGCCTACGACCCAAGCCCCGGTCAA34666540GACACAACCTTGGACAGCAATGTAAGCCGCCCATCCCAAGTAATTCAGAG
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:34672415-34672434
CTCGTGGCCTACGACCCAAGCCCCGGTTAA34672415GACACAACCTTGGACAGCAATGTAAGCTGCCCAGCCCAAGTAATTAATAG
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:35069041-35069060
CTCATGGCCTACGACCCAAGCCCCGGTCAA35069041GACACAACCTTGGACAGCAATGTAAGCCGCCCATCCCAAGTAATTAAGAG
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:35073099-35073118
CTCATGGCCTACGACCCAAGCCCCGGTCAA35073099GACACAACCTTGGACAGCAATGTAAGCTGCCCAGCCCAAGTAATTAAGAG
PG07032G03 Ginseng cDNA library from MeJA treated hairy root Panax ginseng cDNA clone PG07032G03 5', mRNA sequence.
CN848474.1:336-355
CTCTCAATTACTTGGGTTGGGCTGCTTACA336TTGCTGTCCAAGGTTGTGTCCTTACTGGGGCTTGGGTTATAGGCCATGAA
dca0_000617.z1 Siberian ginseng embryogenic cell cluster library Eleutherococcus senticosus cDNA, mRNA sequence.
JZ511835.1:322-341
CTCTCAACTACTTGGGTTGGGCCGCTTATA322TTGCTGTCCAAGGTTGTGTCCTAACGGGGGCTTGGGTTGTAGGCCATGAA
dca0_000694.z1 Siberian ginseng embryogenic cell cluster library Eleutherococcus senticosus cDNA, mRNA sequence.
JZ511887.1:322-341
CTCTCAACTACTTGGGTTGGGCCGCTTATA322TTGCTGTCCAAGGTTGTGTCCTAACGGGGGCTTGGGTTGTAGGCCATGAA
rdcb0_000286.y1 Siberian ginseng embryogenic cell cluster library Eleutherococcus senticosus cDNA, mRNA sequence.
JZ512148.1:333-352
CTCTCAACTACTTGGGTTGGGCCGCTTATA333TTGCTGTCCAAGGTTGTGTCCTAACGGGGGCTTGGGTTGTAGGCCATGAA
Daucus carota delta12-fatty acid acetylenase gene, partial cds.
AY166774.1:161-180
CTCTTAATTACTTGGGATGGGCGGCTTACA161TTGCTGTCCAAGGTTGTGTCTTAACCGGGGCTTGGGTCGTAGGCCATGAG
Tetradesmus obliquus strain DOE0152z chromosome 1b.
CP126208.1:9462822-9462841
AGCTGCTGTTCTCGTGATCAACTGCGACAC9462822TTGCTGTCCAAGGTTGTGTCGATAGCATGCAACTGTTGCATGTGCAGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GACACAACCTTGGACAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GACACAACCTTGGACAGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.290 | 0.282 | search_plus_done; http://172.18.8.135:50400/match?q=GACACAACCTTGGACAGCAA&k=0&no_gap=0&offset=0&limit=50
0.708 | 0.418 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCTGTCCAAGGTTGTGTC&k=0&no_gap=0&offset=0&limit=42
0.712 | 0.004 | cgi_end;

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