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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:49:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Triticum timopheevii genome assembly, chromosome: 4At.
OY997267.1:123308665-123308684
GAACTGTGTGTCTAAGGTTGATCGTAACAG123308665GAGACAGGGGATGATGAAGGAGTGCACCTAGGGTAGGGTCATAGACCTGA
Harmothoe impar genome assembly, chromosome: 4.
OX381707.1:59140505-59140524
TGGTGACAATGGACTGTAGCAAGCCTGCAG59140505GAGACAGGGGATGATGAAGGAATGGGATGGAGAAGGTTTTCTCACTTGAT
Erpetoichthys calabaricus genome assembly, chromosome: 3.
LR536434.2:8266459-8266478
ATTGCCCACCATGGCCTAGAAAATCTGGTC8266459CCTTCATCATCCCCTGTCTCTAATTGGCTAAGTATCTCTCACCCCTTCAC
Solanum dulcamara genome assembly, chromosome: 5.
OX359256.1:2468608-2468627
ACACCAAAATCCCCTTTTCCATACTCAAAA2468608CCTTCATCATCCCCTGTCTCTTCAAAATTCAACCCACTCATCCCCGCTGC
Triticum monococcum genome assembly, chromosome: 4A.
OY737853.1:117607378-117607397
TCAGGTCTATGACCCTACCCTAGGTGCACT117607378CCTTCATCATCCCCTGTCTCCCGTTACCATCAACCTTAGACACATAGTTT
Triticum monococcum genome assembly, chromosome: 4A.
OY737861.1:117822220-117822239
TCAGGTCTATGACCCTACCCTAGGTGCACT117822220CCTTCATCATCCCCTGTCTCCCGTTACCATCAACCTTAGACACATAGTTT
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:678791193-678791212
GCTCCATAAACTTGGCTTCATAATCATTAA678791193CCTTCATCATCCCCTGTCTCATCTGCTCAGATTGTGAAATCTTCTCATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGACAGGGGATGATGAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGACAGGGGATGATGAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.162 | 0.153 | search_plus_done; http://172.18.8.135:50400/match?q=GAGACAGGGGATGATGAAGG&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCATCATCCCCTGTCTC&k=0&no_gap=0&offset=0&limit=48
0.269 | 0.004 | cgi_end;

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