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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 13:02:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Globicephala melas genome assembly, chromosome: 21.
OY734060.1:7304752-7304771
GACCCCTTGGCGTTTCCAGCTGTGAACTAA7304752GAGAGCACCAGCCAGGATAGACAGTGCCAGCTCCGTCAGAGCTGCTCAAA
Orcinus orca genome assembly, chromosome: 21.
OW443381.1:27957793-27957812
TTGGAGCAGCTCTGACGGAGCTGGCACCGT27957793CTATCCTGGCTGGTGCTCTCTTAGTTCACGGCTGGAAACGCCAAGGTGTC
Eptesicus nilssonii genome assembly, chromosome: 17.
OX621296.1:28008316-28008335
GGGGATTTGGCTTCCCCTGGATGGAGACAG28008316CTATCCTGGCTGGTGCTCTCAGGGTCTGTGGTCAGCGAACCTCTCGGGGG
KS16052A10 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074296.1:567-586
CTGGACAAGTCAAGATACGACCAAGAAGGA567CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
KS17037E01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078970.1:202-221
CTGGACAAGTCAAGATACGACCAAGAAGGA202CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
TSA: Capsicum annuum MGMT_Contig48327 mRNA sequence.
JW098571.1:101-120
CTGGACAAGTCAAGATACGACCAAGAAGGA101CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:13353236-13353255
CTGGACAAGTCAAGATACGACCAAGAAGGA13353236CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:13818847-13818866
CTGGACAAGTCAAGATACGACCAAGAAGGA13818847CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGAGCACCAGCCAGGATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGCACCAGCCAGGATAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.219 | 0.211 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAGCACCAGCCAGGATAG&k=0&no_gap=0&offset=0&limit=50
0.456 | 0.236 | search_minus_done; http://172.18.8.135:50400/match?q=CTATCCTGGCTGGTGCTCTC&k=0&no_gap=0&offset=0&limit=49
0.460 | 0.005 | cgi_end;

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