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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:08:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dianthus caryophyllus mRNA, clone: CES02O24, 5' end sequence.
FY383198.1:403-422
TGACACCGATGACAAGCCAGCAAAGAAGCA403GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
Dianthus caryophyllus mRNA, clone: CES09B04, 5' end sequence.
FY385531.1:403-422
TGACACCGATGACAAGCCAGCAAAGAAGCA403GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
Dianthus caryophyllus mRNA, clone: CFES19_E23, 5' end sequence.
FY401083.1:425-444
TGACACCGATGACAAGCCAGCAAAGAAGCA425GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.23.C1.
FX296515.1:515-534
TGACACCGATGACAAGCCAGCAAAGAAGCA515GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.23.C2.
FX296516.1:112-131
CTTTCAGGGGATCTGTGGATGCTGCCTTGG112GAGTTGGAGCTGTTTGGCTCTGCTTCTTTGCTGGCTTGTCATCGGTGTCA
Volucella inanis genome assembly, chromosome: 2.
OU026155.1:19167584-19167603
ATTCTATGAGGTATTTGCCATGTCAACAAA19167584GAGTTGGAGCTGTTTGGCTCGCGTTGATTACCATTCTTCGCTAAGAGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGCCAAACAGCTCCAACTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCCAAACAGCTCCAACTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.487 | 0.478 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCCAAACAGCTCCAACTC&k=0&no_gap=0&offset=0&limit=50
0.606 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTGGAGCTGTTTGGCTC&k=0&no_gap=0&offset=0&limit=46
0.607 | 0.002 | cgi_end;

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