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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:49:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 8 from Patent WO2010025888.
HC473799.1:950-970
AAACAAGTGAAAAATATAGTTGCAACTCAT950GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Sequence 8 from patent US 8637737.
HK309016.1:950-970
AAACAAGTGAAAAATATAGTTGCAACTCAT950GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
JP 2012501172-A/7: ENGINEERING OF BOLTING RESISTANCE IN SUGAR BEET BY MEANS OF THE TRANSGENIC EXPRESSION OF THE BEET HOMOLOGUE OF FLOWERING TIME CONTROL GENE FT.
HV571885.1:950-970
AAACAAGTGAAAAATATAGTTGCAACTCAT950GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Sequence 34 from Patent EP3546582.
MP338146.1:816-836
AAACAAGTGAAAAATATAGTTGCAACTCAT816GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Sequence 34 from Patent WO2019185609.
MP338237.1:816-836
AAACAAGTGAAAAATATAGTTGCAACTCAT816GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
66-L108505-1033-133-D18-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-133-D18 5', genomic survey sequence.
JY378879.1:467-487
AAACAAGTGAAAAATATAGTTGCAACTCAT467GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Beta vulgaris flowering locus T-like protein FT2 (FT2) gene, complete cds.
HM448911.1:950-970
AAACAAGTGAAAAATATAGTTGCAACTCAT950GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:3935208-3935228
AAACAAGTGAAAAATATAGTTGCAACTCAT3935208GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392559.1:3955457-3955477
AAACAAGTGAAAAATATAGTTGCAACTCAT3955457GATGCAACATGAGATGCGATGAAATATGATAGTAACTTGAGCTCACAACTC
Chenopodium album genome assembly, chromosome: 13.
OX419220.1:3321170-3321190
AAAACATATAATGAAGATATAGTTGCTACT3321170GATGCAACATGAGATGCGATGATAGATGATGGGAACCTGCGTTGAGGACTC
Chenopodium album genome assembly, chromosome: 22.
OX419229.1:2891832-2891852
AAAACATATAATGAAGAGATAGTTGCTACT2891832GATGCAACATGAGATGCGATGATAGATGATGGGAACCTGCGTTGAGGACTC
Chenopodium album genome assembly, chromosome: 22.
OX419229.1:9711040-9711060
ACATATAATGATCATGATATATTCGCTTCT9711040GATGCAACATGAGATGCGATGATAGATGATAGGAACCTGCGTTGATTACTC
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:17814635-17814655
GAGTAATCAACGCAGGTTCCCATCATCTAT17814635CATCGCATCTCATGTTGCATCAGAAGCGAATATATCTTCATCATTATATGT
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:18011718-18011738
GAGTCCTAAACGCAGGTTCCCACCATCTAT18011718CATCGCATCTCATGTTGCATCAGAAAGCAAATATATCTTCATTATTATATG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:18125550-18125570
GAGTCCTAAACGCAGGTTCCCACCATCTAT18125550CATCGCATCTCATGTTGCATCAGAAAGCAAATATATCTTCATTATAATATG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:18143946-18143966
GAGTCCTAAACGCAGGTTCCCACCATCTAT18143946CATCGCATCTCATGTTGCATCAGAAAGCAAATATATCTTCATTATTATATG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:18144918-18144938
GAGTCCTAAACGCAGGTTCCCATCATCTAT18144918CATCGCATCTCATGTTGCATCAGAAAGCAAATATATCTTCATTATTATATG
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:31141851-31141871
GAGTCCTCAACGCAGGTTCCCATCATCTAT31141851CATCGCATCTCATGTTGCATCAGAAGTAAATATATCTTCATCATTATATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATGCAACATGAGATGCGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGCAACATGAGATGCGATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.410 | 0.401 | search_plus_done; http://172.18.8.135:50400/match?q=GATGCAACATGAGATGCGATG&k=0&no_gap=0&offset=0&limit=50
0.500 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=CATCGCATCTCATGTTGCATC&k=0&no_gap=0&offset=0&limit=38
0.504 | 0.004 | cgi_end;

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