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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:55:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium herbaceum isolate GPA1alz chromosome 10.
CP106701.1:845867-845891
GGGATTCTTCTGCCGTGGAAATCCATGAGG845867GCAAAAATCTACACGTGTTGAAGCTGTTTCTTGAGTTACATTTATAAATTCCCGT
Gossypium herbaceum isolate GPA1alz chromosome 10.
CP106701.1:852739-852763
GAGATTCTTCTGCCGCGGAAATCCATGAGG852739GCAAAAATCTACACGTGTTGAAGCTGTTTCTTGAGTTACATGTATAAATTCTCGT
Gossypium herbaceum isolate Zhongcao1 chromosome 10.
CP106689.1:118926253-118926277
ACGAGAATTTATACATGTAACTCAAGAAAC118926253AGCTTCAACACGTGTAGATTTTTGCCCTCATGGATTTCCGCGGCAGAAGAATCTC
Gossypium herbaceum isolate Zhongcao1 chromosome 10.
CP106689.1:118933130-118933154
ACGGGAATTTATAAATGTAACTCAAGAAAC118933130AGCTTCAACACGTGTAGATTTTTGCCCTCATGGATTTCCACGGCAGAAGAATCCC
Gossypium hirsutum chromosome 10 SNP marker NG0203671 associated with blue disease resistance genomic sequence.
GU265861.1:318-342
ACGAGAATTTATAAATGTAACTCAAGAANC318AGCTTCAACACGTGTAGATTTTTGCCCNCATGGATTTCCNCGGCAGAAGAATCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAAAATCTACACGTGTTGAAGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAAAATCTACACGTGTTGAAGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.226 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAAAATCTACACGTGTTGAAGCT&k=0&no_gap=0&offset=0&limit=50
0.316 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=AGCTTCAACACGTGTAGATTTTTGC&k=0&no_gap=0&offset=0&limit=48
0.318 | 0.002 | cgi_end;

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