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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:04:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Manihot esculenta mRNA, clone: CAS01_013_C04, 5'end.
DB924415.1:310-331
ACTCTAATGGCCGCGTTGAAGAGATCAGTG310GCACAATCCGAGCAAGCGAGATCATGAAAGCATACCCAAAACATGTCTTGAA
Manihot esculenta mRNA, clone: CAS01_014_C09, 5'end.
DB924790.1:226-247
ACTCTAATGGCCGCGTTGAAGAGATCAGTG226GCACAATCCGAGCAAGCGAGATCATGAAAGCATACCCAAAACATGTCTTGAA
Manihot esculenta mRNA, clone: CAS01_024_N10, 5'end.
DB928631.1:271-292
ACTCTAATGGCCAAGTAGAAGAAATCAGTG271GCACAATCCGAGCAAGCGAGATCATGAAAGCTCACCCAAAACACGTCTTGAA
U_SX-090909_plate73p12.b1 Full-length enriched cDNA library of cassava MECU72 Manihot esculenta cDNA, mRNA sequence.
JG972753.1:237-258
ACTCTAATGGCCGCGTTGAAGAGATCAGTG237GCACAATCCGAGCAAGCGAGATCATGAAAGCATACCCAAAACATGTCTTGAA
U_SX-090916_plate68o10.b1 Full-length enriched cDNA library of cassava MECU72 Manihot esculenta cDNA, mRNA sequence.
JG975202.1:237-258
ACTCTAATGGCCGCGTTGAAGAGATCAGTG237GCACAATCCGAGCAAGCGAGATCATGAAAGCATACCCAAAACATGTCTTGAA
U_SX-090916_plate70n18.b1 Full-length enriched cDNA library of cassava MECU72 Manihot esculenta cDNA, mRNA sequence.
JG975466.1:165-186
ACTCTAATGGCCGCGTTGAAGAGATCAGTG165GCACAATCCGAGCAAGCGAGATCATGAAAGCATACCCAAAACATGTCTTGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACAATCCGAGCAAGCGAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACAATCCGAGCAAGCGAGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.528 | 0.520 | search_plus_done; http://172.18.8.135:50400/match?q=GCACAATCCGAGCAAGCGAGAT&k=0&no_gap=0&offset=0&limit=50
0.618 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTCGCTTGCTCGGATTGTGC&k=0&no_gap=0&offset=0&limit=44
0.618 | 0.000 | cgi_end;

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