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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:48:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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CGN-150 Pericarp Coffea canephora cDNA clone cccp16k5 5', mRNA sequence.
DV663471.1:187-214
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA187GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-2417 Pericarp Coffea canephora cDNA clone cccp10g22 5', mRNA sequence.
DV665055.1:403-430
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA403GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-3615 Pericarp Coffea canephora cDNA clone cccp10d23 5', mRNA sequence.
DV665933.1:416-443
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA416GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-5745 Pericarp Coffea canephora cDNA clone cccp22e21 5', mRNA sequence.
DV667485.1:393-420
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA393GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-6389 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w3a23 5', mRNA sequence.
DV667945.1:379-406
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA379GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-6492 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w4a10 5', mRNA sequence.
DV668027.1:397-424
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA397GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTG
CGN-7679 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w5f22 5', mRNA sequence.
DV672197.1:405-432
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA405GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-12414 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w5p17 5', mRNA sequence.
DV675442.1:313-340
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA313GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-13467 Cherry of Early Development Stage Coffea canephora cDNA clone cccs18w7e23 5', mRNA sequence.
DV676626.1:210-237
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA210GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-17654 Pericarp Coffea canephora cDNA clone cccp18c24 5', mRNA sequence.
DV679444.1:400-427
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA400GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-19204 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w29b11 5', mRNA sequence.
DV680517.1:383-410
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA383GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-21831 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w22h5 5', mRNA sequence.
DV682165.1:394-421
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA394GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-23437 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w27e10 5', mRNA sequence.
DV683176.1:291-318
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA291GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-40469 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w12e14 5', mRNA sequence.
DV695564.1:346-373
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA346GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-49194 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w25k16 5', mRNA sequence.
DV702754.1:389-416
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA389GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-49625 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w25j15 5', mRNA sequence.
DV703121.1:306-333
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA306GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-51371 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w2o4 5', mRNA sequence.
DV704552.1:416-443
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA416GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-51992 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w10o19 5', mRNA sequence.
DV705042.1:406-433
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA406GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-56552 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w13h13 5', mRNA sequence.
DV708510.1:406-433
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA406GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-57590 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w19j24 5', mRNA sequence.
DV709319.1:414-441
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA414GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-57974 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w18h8 5', mRNA sequence.
DV709623.1:202-229
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA202GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CGN-60750 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w25h13 5', mRNA sequence.
DV711844.1:406-433
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA406GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CC-L01_046_G05 Coffea young leaves Coffea canephora cDNA clone CC-L01_046_G05, mRNA sequence.
EE194839.1:399-426
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA399GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CC-F01_014_C21 Cherry of different development stage Coffea canephora cDNA clone CC-F01_014_C21, mRNA sequence.
EE198867.1:38-65
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA38GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CC-F01_018_L14 Cherry of different development stage Coffea canephora cDNA clone CC-F01_018_L14, mRNA sequence.
EE200137.1:341-368
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA341GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CC-F01_019_I12 Cherry of different development stage Coffea canephora cDNA clone CC-F01_019_I12, mRNA sequence.
EE200400.1:375-402
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA375GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
ctsc1c3 Tomato Seed Library [C] Solanum lycopersicum cDNA clone cTSC-1-C3 5', mRNA sequence.
GO373835.1:444-471
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA444GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
TransId-211412 CACATN1 Coffea arabica cDNA clone CACATN1-3I94TV, mRNA sequence.
GT000919.1:92-119
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA92GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
TransId-207508 CACATN1 Coffea arabica cDNA clone CACATN1-2705TV, mRNA sequence.
GT002543.1:375-402
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA375GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
TransId-234528 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEWW08TV, mRNA sequence.
GT007192.1:431-458
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA431GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
TransId-260773 CAHT1343PER Coffea arabica cDNA clone CAHT1343PER-CAHTE57TV, mRNA sequence.
GT016573.1:420-447
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA420GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
TransId-279097 CarCatBudEnri2 Coffea arabica cDNA clone CarCatBudEnri2_57-D10-PAL17d, mRNA sequence.
GT020183.1:429-456
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA429GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-CA1-007-H10-BG.F Coffea arabica CA1 Coffea arabica cDNA clone CA00-XX-CA1-007-H10-BG, mRNA sequence.
GT688530.1:376-403
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA376GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-CA1-043-C10-MC.F Coffea arabica CA1 Coffea arabica cDNA clone CA00-XX-CA1-043-C10-MC, mRNA sequence.
GT688531.1:315-342
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA315GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-FB2-040-A10-AB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-040-A10-AB, mRNA sequence.
GT703883.1:402-429
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA402GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-FB2-016-H07-BM.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-016-H07-BM, mRNA sequence.
GT703884.1:347-374
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA347GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-FB2-014-E12-AB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-014-E12-AB, mRNA sequence.
GT703885.1:331-358
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA331GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-FB2-075-D10-CC.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-075-D10-CC, mRNA sequence.
GT703886.1:387-414
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA387GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-FB2-007-C10-SB.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-007-C10-SB, mRNA sequence.
GT703887.1:371-398
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA371GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-FB2-039-D04-QH.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-039-D04-QH, mRNA sequence.
GT703888.1:317-344
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA317GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-FB2-033-C06-RF.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-033-C06-RF, mRNA sequence.
GT703889.1:402-429
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA402GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-FB2-036-F09-BM.F Coffea arabica FB2 Coffea arabica cDNA clone CA00-XX-FB2-036-F09-BM, mRNA sequence.
GT703890.1:322-349
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA322GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-FB1-051-D06-JF.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-051-D06-JF, mRNA sequence.
GT709664.1:399-426
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA399GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAA
CA00-XX-FB1-045-B06-JM.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-045-B06-JM, mRNA sequence.
GT709665.1:348-375
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA348GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-RM1-034-A02-EP.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-034-A02-EP, mRNA sequence.
GT710759.1:375-402
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA375GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAATAAC
CA00-XX-RT8-058-F07-EZ.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-058-F07-EZ, mRNA sequence.
GT728451.1:612-639
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA612GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAC
CA00-XX-RT8-066-A11-SB.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-066-A11-SB, mRNA sequence.
GT728452.1:598-625
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA598GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCAGTTGAAGAAGTAA
CA00-XX-RX1-035-G11-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-035-G11-EB, mRNA sequence.
GT730814.1:76-103
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA76GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-RX1-027-C08-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-027-C08-EB, mRNA sequence.
GT730816.1:402-429
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA402GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
CA00-XX-RX1-006-C09-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-006-C09-EB, mRNA sequence.
GT730817.1:374-401
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA374GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA
AFP0AAA2YE02FM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO568453.1:377-404
GAAACTCCTGCAGTCAAAGAAGCTCCAGCA377GCAGAAGAAGCACCAGTAGCAGAAGAAGCAGCCAAGATCGAGCCTGTTGAAGAAGTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGAAGAAGCACCAGTAGCAGAAGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGAAGAAGCACCAGTAGCAGAAGAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.517 | 3.509 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGAAGAAGCACCAGTAGCAGAAGAAG&k=0&no_gap=0&offset=0&limit=50
3.598 | 0.081 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTTCTGCTACTGGTGCTTCTTCTGC&k=0&no_gap=0&offset=0&limit=0
3.598 | 0.000 | cgi_end;

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