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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:21:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gallus gallus breed Huxu chromosome 4.
CP100558.1:31899976-31899993
GCCCTCCACTGCCCCCACTGAGCAGCAGCA31899976GCAGCAAAGCCCTTAGGCCCTGGCTTTGGCACTATAACATCCACTTAA
Coregonus sp. 'balchen' genome assembly, chromosome: 13.
LR778265.1:33085589-33085606
GAGACCTCGACAAACAAAAGGAAGAATGAG33085589GCAGCAAAGCCCTTAGGCAAGCCGTAAGTAATTAAAAAGGCCTGTAAA
Fringilla coelebs genome assembly, chromosome: 22.
OY740746.1:2641428-2641445
CTTAGGAATTTAGCAGCAAAGGTTCATTTA2641428GCAGCAAAGCCCTTAGGCACTATTTGCAGCCGCTTCTCAGGCTGCTCC
AGENCOURT_8751106 NIH_MGC_130 Mus musculus cDNA clone IMAGE:6333917 5', mRNA sequence.
BQ895785.1:858-875
CCTTTCCCCCCTAGCTGGGGTACACCCCAG858GCAGCAAAGCCCTTAGGCTTCCC
Elaeis guineensis EST, clone (6lib)_isotig24375.
LM615066.1:1910-1927
TGTAAATATTTTGCCTGTCTTGCAATTTTT1910GCAGCAAAGCCCTTAGGCCGAACATCACTATCATCCTCATCAGTATCA
Helleia helle genome assembly, chromosome: 8.
OY971422.1:12651549-12651566
TGTTGTAGCTAAGCCCTTAGGCTGTGTGTT12651549GCAGCAAAGCCCTTAGGCTGTGTCGCCGCGAAACGCATAGGCTGTTTG
Salmo trutta genome assembly, chromosome: 19.
LR584427.1:24918851-24918868
TTTACAGGCCTATTTAATTACTTACAGCTT24918851GCCTAAGGGCTTTGCTGCCTCATTCTTTCTTTTGTTTGTCGAGGTCTC
Microcaecilia unicolor genome assembly, chromosome: 14.
LR594645.1:50573976-50573993
AAAAATTAATTTGAGTTATTTGCATTTTAT50573976GCCTAAGGGCTTTGCTGCAGATAACGTGAGCTAATCTTTGGTAAAAGA
Nannobrachium achirus genome assembly, chromosome: 4.
OY997641.1:46610226-46610243
AAAACTAGATACCGCCTGCCTGGCTGAGTT46610226GCCTAAGGGCTTTGCTGCCACCTGTTATAGCACCACCATGAGGCTGAT
CHO_OF743xa09f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET815131.1:213-230
CCTTATTATATGAACTTAAGAGTCACATTT213GCCTAAGGGCTTTGCTGCCACATTGAGTTCCATTAGGCTTATCCAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAGCAAAGCCCTTAGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAGCAAAGCCCTTAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.292 | 0.283 | search_plus_done; http://172.18.8.135:50400/match?q=GCAGCAAAGCCCTTAGGC&k=0&no_gap=0&offset=0&limit=50
0.414 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTAAGGGCTTTGCTGC&k=0&no_gap=0&offset=0&limit=44
0.417 | 0.003 | cgi_end;

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