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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:24:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 16 from Patent WO2013111018.
JC293910.1:1720-1742
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG1720GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
Sequence 16 from patent US 9574202.
KH569199.1:1720-1742
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG1720GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
UCRCS01_04de01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04de01, mRNA sequence.
CB292664.1:46-68
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG46GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
UCRCS01_05bh01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05bh01, mRNA sequence.
CB293032.1:76-98
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG76GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
UCRCS04_0002C17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002C17, mRNA sequence.
CN182254.1:125-147
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG125GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
C04004G01SK FlavFr1 Citrus clementina cDNA clone C04004G01, mRNA sequence.
CX291776.1:89-111
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG89GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
UCRCS11_03F12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003F12, mRNA sequence.
DN619014.1:104-126
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG104GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
USDA-FP/ARO_14832 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-18_G12 5', mRNA sequence.
DN959002.1:38-60
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG38GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
KN0AAP2YE20FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261268.1:72-94
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG72GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA10BD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY262926.1:67-89
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG67GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA12DE07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263837.1:20-42
CTCATTTCTCTGTGCTCTG20GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA1BC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY266570.1:121-143
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG121GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA38DB11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275216.1:76-98
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG76GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA40BG06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276179.1:121-143
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG121GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA75AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290292.1:16-38
TTTCTCTGTGCTCTG16GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA78BB11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY291490.1:144-166
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG144GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA94BF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298022.1:40-62
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG40GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
CS00-C3-700-036-B10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY695415.1:234-256
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG234GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA78BB11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78BB11, mRNA sequence.
FC880599.1:144-166
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG144GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA38DB11RM2 IVIA1 Citrus clementina cDNA clone IC0AAA38DB11, mRNA sequence.
FC881349.1:71-93
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG71GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA75AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AA05, mRNA sequence.
FC882711.1:16-38
TTTCTCTGTGCTCTG16GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA12DE07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12DE07, mRNA sequence.
FC894322.1:20-42
CTCATTTCTCTGTGCTCTG20GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA40BG06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA40BG06, mRNA sequence.
FC904495.1:121-143
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG121GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA1BC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1BC06, mRNA sequence.
FC906164.1:121-143
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG121GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA94BF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94BF08, mRNA sequence.
FC913173.1:40-62
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG40GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
IC0AAA10BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10BD07, mRNA sequence.
FC914684.1:67-89
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG67GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
KN0AAP2YE20FM1 TF Citrus clementina cDNA clone KN0AAP2YE20, mRNA sequence.
FC926783.1:72-94
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG72GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
C34107F09EF PostHarvP1 Citrus clementina cDNA clone C34107F09, mRNA sequence.
FC931666.1:17-39
ATTTCTCTGCGCTCTG17GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
Citrus sinensis capsanthin/capsorubin synthase (CCS) gene, complete cds.
AF169241.1:1720-1742
CTTTTGTCTTTCTCATTTCTCTGCGCTCTG1720GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:17219466-17219488
CTTTTGTCTTTCTCATTTCTCTGTGCTCTG17219466GCATGGCAACTCTTCTTAGCCCGTTTTCTCCTTCTCCTTTAGCTAAAGTTTCG
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:27616983-27617005
CGAAACTTTAGCTAAAGGAGAAGGAGAAAA27616983CGGGCTAAGAAGAGTTGCCATGCCAGAGCGCAGAGAAATGAGAAAGACAAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCATGGCAACTCTTCTTAGCCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCATGGCAACTCTTCTTAGCCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.963 | 1.954 | search_plus_done; http://172.18.8.135:50400/match?q=GCATGGCAACTCTTCTTAGCCCG&k=0&no_gap=0&offset=0&limit=50
2.009 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=CGGGCTAAGAAGAGTTGCCATGC&k=0&no_gap=0&offset=0&limit=20
2.010 | 0.001 | cgi_end;

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