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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 04:48:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum lycopersicum TYNBS1 gene for disease resistance protein, complete cds, cultivar: TY-Chie.
LC222648.1:42070-42089
GACGACAAGGGAAACCCGCAGCCTTTGGGT42070GCCACCTGGACAGTGTTTCTGGAAGGATTAAGTGATAGACGCTACATGTG
CON_327 Tomato Genome SNP,Indel Search Library Solanum lycopersicum genomic clone CON_327, genomic survey sequence.
ET165858.1:815-834
TTCATTAAATAGCATATCGGGGATGCTTCC815AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Solanum lycopersicum Micro-Tom DNA, chromosome 11, draft genome sequence.
AP028945.1:59939432-59939451
TTCATTAAATAGCATATCGGGGATGCTTCC59939432AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Solanum lycopersicum cultivar I-3 chromosome 11.
CP023767.1:54531153-54531172
TTCATTAAATAGCATATCGGGGATGCTTCC54531153AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Solanum lycopersicum chromosome ch11, complete genome.
HG975523.1:51611864-51611883
TTCATTAAATAGCATATCGGGGATGCTTCC51611864AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Solanum lycopersicum TYNBS2_Ch gene for disease resistance protein, complete cds, cultivar: TY-Chie.
LC222652.1:1202-1221
TTCATTAAATAGCATATCGGGGATGCTTCC1202AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Solanum lycopersicum genome assembly, chromosome: 11.
OU640354.1:55446044-55446063
TTCATTAAATAGCATATCGGGGATGCTTCC55446044AGAAACACTGTCCAGGTGGCACCCAAAGGCTGCGGGTTTCCCTTGTCGTC
Harmothoe impar genome assembly, chromosome: 15.
OX381718.1:54366998-54367017
ACCTTTAGAAATATGACCTTACATTTCAAC54366998AGAAACACTGTCCAGGTGGCAAGGTGATGACCTGATGAAGGTCTATCACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCACCTGGACAGTGTTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCACCTGGACAGTGTTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50800/match?q=GCCACCTGGACAGTGTTTCT&k=0&no_gap=0&offset=0&limit=50
0.371 | 0.164 | search_minus_done; http://172.18.8.135:50800/match?q=AGAAACACTGTCCAGGTGGC&k=0&no_gap=0&offset=0&limit=49
0.376 | 0.005 | cgi_end;

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