GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 17:53:15, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Equus caballus genome assembly, chromosome: 8.
OZ027688.1:71286487-71286506
AGAGGTGAGAAAGGAAGGATTAGACAAAAT71286487GCCAGGTGTGACTCCTTCTCACCATTATATTCTTCTTCTTCCACCCCTTC
Equus caballus genome assembly, chromosome: 8.
OZ027720.1:70913879-70913898
AGAGGTGAGAAAGGAAGGATTAGACAAAAT70913879GCCAGGTGTGACTCCTTCTCACCATTATATTCTTCTTCTTCCACCCCTTC
Equus caballus GSS, BAC clone CH241-184F14, T7 end sequence.
CU087361.1:172-191
AGAGGTGAGAAAGGAAGGATTAAACAAAAT172GCCAGGTGTGACTCCTTCTCACCATTATATTCTTCTTCTTCCACCCCTTC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6478280-6478299
TAACCTCAACCAATCAGATTCAACCAAACT6478280GCCAGGTGTGACTCCTTCTCCACCAATACCATTAAAAACTTGCCAGATGA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6713896-6713915
CAACCTCAACCAATCAGATTCAACCAAACT6713896GCCAGGTGTGACTCCTTCTCCACCAATACCATTAAAAACTTGCCAGATGA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6629884-6629903
CAACCTCAACCAATCAGATTCAACCAAACT6629884GCCAGGTGTGACTCCTTCTCCACCAATACCATTAAAAACTTGCCAGATGA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6420030-6420049
CAACCTCAACCAATCAGATTCAACCAAACT6420030GCCAGGTGTGACTCCTTCTCCACCAATACCATTAAAAACTTGCCAGATGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 4C.
OZ287408.1:5929363-5929382
CAACCTCAACCAATCAGATTCAACCAAACT5929363GCCAGGTGTGACTCCTTCTCCACCAATACCTTTAAAAACTTCCCAGATGA
Karpatiosorbus bristoliensis genome assembly, chromosome: 4B.
OZ287448.1:6263943-6263962
CAACCTCAACCAATCAGATTCAACCAAACT6263943GCCAGGTGTGACTCCTTCTCCACCAATACCTTTAAAAACTTCCCAGATGA
Closterotomus trivialis genome assembly, chromosome: 8.
OZ243027.1:31531959-31531978
TGGCTGTGGTACACAGGGCATCCACTATCA31531959GCCAGGTGTGACTCCTTCTCGTCTACCTGGTGGGCCACAACCGCAAGGCC
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:40123343-40123362
TCATCTGGCAAGTTTTTAATGGTATTGGTG40123343GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36825677-36825696
TCATCTGGCAAGTTTTTAATGGTATTGATG36825677GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar Red Fuji chromosome 5.
CP147797.1:39557313-39557332
TCATCTGGCAAGTTTTTAATGGTATTGGTG39557313GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar Red Fuji chromosome 5.
CP147822.1:40406584-40406603
TCATCTGGCAAGTTTTTAATGGTATTGGTG40406584GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus ioensis cultivar PI590015 chromosome 5.
CP154728.1:39789417-39789436
TCATCTGGCAAGTTTTTAATGGTATTGGTG39789417GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus ioensis cultivar PI590015 chromosome 5.
CP154745.1:40602269-40602288
TCATCTGGCAAGTTTTTAATGGTATTGGTG40602269GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus coronaria cultivar PI590014 chromosome 5.
CP154779.1:40832283-40832302
TCATCTGGCAAGTTTTTAATGGTATTGGTG40832283GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar WA 38 chromosome 5B.
CP165688.1:39377347-39377366
TCATCTGGCAAGTTTTTAATGGTATTGGTG39377347GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar WA 38 chromosome 5A.
CP165705.1:39446866-39446885
TCATCTGGCAAGTTTTTAATGGTATTGGTG39446866GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar Golden Delicious chromosome 05.
CP168769.1:39177308-39177327
TCATCTGGCAAGTTTTTAATGGTATTGGTG39177308GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica cultivar Golden Delicious chromosome 05.
CP168786.1:40208628-40208647
TCATCTGGCAAGTTTTTAATGGTATTGGTG40208628GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:40424924-40424943
TCATCTGGCAAGTTTTTAATGGTATTGGTG40424924GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica genome assembly, chromosome: 5.
OU696681.1:39721784-39721803
TCATCTGGCAAGTTTTTAATGGTATTGGTG39721784GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica genome assembly, chromosome: 5.
OU744546.1:39276192-39276211
TCATCTGGCAAGTTTTTAATGGTATTGGTG39276192GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica genome assembly, chromosome: 5.
OU744957.1:39739902-39739921
TCATCTGGCCAGTTTTTAATGGTATTGGTG39739902GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG
Malus domestica genome assembly, chromosome: 5.
OU744995.1:40572342-40572361
TCATCTGGCAAGTTTTTAATGGTATTGGTG40572342GAGAAGGAGTCACACCTGGCAGTTTGGTTGAATCTGATTGGTTGAGGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCAGGTGTGACTCCTTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCAGGTGTGACTCCTTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.303 | 0.293 | search_plus_done; http://172.18.8.135:50900/match?q=GCCAGGTGTGACTCCTTCTC&k=0&no_gap=0&offset=0&limit=50
0.594 | 0.291 | search_minus_done; http://172.18.8.135:50900/match?q=GAGAAGGAGTCACACCTGGC&k=0&no_gap=0&offset=0&limit=40
0.605 | 0.011 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).