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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 20:27:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Callithrix jacchus mRNA, clone: MTE-015G12, 5'end sequence, expressed in testis.
HX596647.1:617-636
TGTATTCCCAATTCAGGCAGCTCAGCAGTG617GCCTGTGATTCCAGCAATTGAAATAGCTGACATCCATGAAGCTTTTTCTG
Arvicola amphibius genome assembly, chromosome: 14.
LR862394.1:16243057-16243076
GCCTACAGCAATTCCCTTTTATCAAGTTCC16243057CAATTGCTGGAATCACAGGCATGATCCCTGATACCTGGTTAGACATAAAC
Blennius ocellaris genome assembly, chromosome: 4.
OY730204.1:11821147-11821166
TTTAGTCAAGGAGTAAGATTTTGAAGAAGA11821147CAATTGCTGGAATCACAGGCAGCCAGTGCAGAGATTGAAGCGCAGCTGTA
Butyrivibrio fibrisolvens 16/4 draft genome.
FP929036.1:1194191-1194210
CAGATTTCTGGCAGTATTCTTCAAAAGAGA1194191CAATTGCTGGAATCACAGGCTATGTAGATGTAAACGTAGCTAGAAAAACC
Butyrivibrio fibrisolvens isolate MGYG-HGUT-02531 genome assembly, chromosome: 1.
LR699013.1:1194191-1194210
CAGATTTCTGGCAGTATTCTTCAAAAGAGA1194191CAATTGCTGGAATCACAGGCTATGTAGATGTAAACGTAGCTAGAAAAACC
Tromatobia lineatoria genome assembly, chromosome: 15.
OX453048.1:13622093-13622112
CAACCCAGTGAGCATCCACCTCAGAGGTTC13622093CAATTGCTGGAATCACAGGCTGATCCTCAAGCTTATTACTATGTCCAGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCCTGTGATTCCAGCAATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCCTGTGATTCCAGCAATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.455 | 0.446 | search_plus_done; http://172.18.8.135:50400/match?q=GCCTGTGATTCCAGCAATTG&k=0&no_gap=0&offset=0&limit=50
0.580 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=CAATTGCTGGAATCACAGGC&k=0&no_gap=0&offset=0&limit=49
0.583 | 0.003 | cgi_end;

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